RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 GDF5P43026 501 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 PTPRRQ15256 657 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 RUNDC3AQ59EK9 446 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 LDLRAD1Q5T700 205 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 CES5AQ6NT32 575 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 MRPL10Q7Z7H8 261 aaKnown RBP17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 ZDHHC21Q8IVQ6 265 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 ZNF566Q969W8 418 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 YIPF2Q9BWQ6 316 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 KAT8Q9H7Z6 458 aaKnown RBP17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 PDFQ9HBH1 243 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 DNMT3BQ9UBC3 853 aaKnown RBP17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 PADI3Q9ULW8 664 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 GMPPBQ9Y5P6 360 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 PMF1-BGLAPU3KQ54 211 aa17.04■□□□□ 0.32
ARHGEF1-213ENST00000595897 F5H5T6 163 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 H0Y626 953 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 RAD51BO15315 384 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 ULK1O75385 1050 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 TRIM16O95361 564 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 PABPC1P11940 636 aaKnown RBP17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 MYCLP1P12525 358 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 ITGB6P18564 788 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 GNPDA1P46926 289 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 HUNKP57058 714 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 TRAF3Q13114 568 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 GLB1L3Q8NCI6 653 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 PYURFQ96I23 114 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 MS4A4AQ96JQ5 239 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 MAGIXQ9H6Y5 334 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 ABCB10Q9NRK6 738 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 ATP11BQ9Y2G3 1177 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 M0QX08 132 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 OXSR1O95747 527 aaPredicted RBP17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 ESR1P03372 595 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 MT-ND2P03891 347 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 KCNJ8Q15842 424 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 ZC3H12BQ5HYM0 836 aaKnown RBP17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 CYP4Z1Q86W10 505 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 ATAD1Q8NBU5 361 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 DYNC2LI1Q8TCX1 351 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 PSKH2Q96QS6 385 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 RHNO1Q9BSD3 238 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 PKP3Q9Y446 797 aa17.03■□□□□ 0.32
ARHGEF1-213ENST00000595897 TACR2P21452 398 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 GRK3P35626 688 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 SLC35A2P78381 396 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 CCL14Q16627 93 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 FAM110CQ1W6H9 321 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 TTC9BQ8N6N2 239 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 HTRA1Q92743 480 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 RPL3LQ92901 407 aaKnown RBP17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 ULK4Q96C45 1275 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 LGALS12Q96DT0 336 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 ZHX1-C8orf76Q96EF9 292 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 REXO5Q96IC2 774 aaKnown RBP17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 ZNF300Q96RE9 604 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 ADAM2Q99965 735 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 RASSF1Q9NS23 344 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 SLC6A13Q9NSD5 602 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 C1orf109Q9NX04 203 aa17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 ZNF490Q9ULM2 529 aaPredicted RBP17.02■□□□□ 0.32
ARHGEF1-213ENST00000595897 RGS10O43665 173 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 FAM20BO75063 409 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 PRLP01236 227 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 ITGAMP11215 1152 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 HOXD9P28356 352 aaPredicted RBP17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 PTGER3P43115 390 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 NRIP1P48552 1158 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 CLCN4P51793 760 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 ARPP19P56211 112 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 SLC13A2Q13183 592 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 CARTPTQ16568 116 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 NFE2Q16621 373 aaPredicted RBP17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 SMN1Q16637 294 aaKnown RBP17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 CPZQ66K79 652 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 PTRHD1Q6GMV3 140 aaKnown RBP17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 ANKRD46Q86W74 232 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 SVOPQ8N4V2 548 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 MTFMTQ96DP5 389 aaKnown RBP17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 YIPF6Q96EC8 236 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 APOL4Q9BPW4 351 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 RMND5AQ9H871 391 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 LRTM1Q9HBL6 345 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 ARIH1Q9Y4X5 557 aaPredicted RBP17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 DOCK4Q8N1I0 1966 aa17.02■□□□□ 0.31
ARHGEF1-213ENST00000595897 CD6P30203 668 aa17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 CLK1P49759 484 aaKnown RBP17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 CLCN7P51798 805 aa17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 TAF10Q12962 218 aa17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 NADSYN1Q6IA69 706 aa17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 SBSNQ6UWP8 590 aa17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 OR52E4Q8NGH9 312 aa17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 PHF10Q8WUB8 498 aaKnown RBP17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 STARD8Q92502 1023 aa17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 BARD1Q99728 777 aaKnown RBP17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 DSN1Q9H410 356 aa17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 DUSP21Q9H596 190 aa17.01■□□□□ 0.31
ARHGEF1-213ENST00000595897 VNN3Q9NY84 501 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms