RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 HMG20AQ9NP66 347 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 ASB1Q9Y576 335 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 WNT6Q9Y6F9 365 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 COMMD10Q9Y6G5 202 aa16.74■□□□□ 0.27
SHKBP1-205ENST00000594973 UNC80Q8N2C7 3258 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 LINC00032P0C843 101 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 EPHA5P54756 1037 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 SMUG1Q53HV7 270 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 RBFAQ8N0V3 343 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 DCBLD1Q8N8Z6 715 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 CHST14Q8NCH0 376 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 OR9I1Q8NGQ6 314 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 LKAAEAR1Q8TD35 194 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 SACM1LQ9NTJ5 587 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 RBMX2Q9Y388 322 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 DHRS7Q9Y394 339 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 TIMM22Q9Y584 194 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 PCDHB1Q9Y5F3 818 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 LINC01553A4QN01 128 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 ANKRD34BA5PLL1 514 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 EIF3FO00303 357 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 JRKO75564 520 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 NAT1P18440 290 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 EN2P19622 333 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 CD9P21926 228 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 ACRV1P26436 265 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 SPAM1P38567 509 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 HLCSP50747 726 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 SQLEQ14534 574 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 SF3B4Q15427 424 aaKnown RBP eCLIP16.73■□□□□ 0.271e-6■■■■■ 60
SHKBP1-205ENST00000594973 RBBP7Q16576 425 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 KANK2Q63ZY3 851 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 RFLNAQ6ZTI6 216 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 RBM23Q86U06 439 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 GPR26Q8NDV2 337 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 SORCS1Q8WY21 1168 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 PPWD1Q96BP3 646 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 SH3YL1Q96HL8 342 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 TUBB1Q9H4B7 451 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 RMND5AQ9H871 391 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 SPHK2Q9NRA0 654 aa16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 EIF2B4Q9UI10 523 aaKnown RBP16.73■□□□□ 0.27
SHKBP1-205ENST00000594973 RGS13O14921 159 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 SEC14L2O76054 403 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 ARHGEF15O94989 841 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 SLC25A14O95258 325 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 FGF4P08620 206 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 RPS17P08708 135 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 ALDOCP09972 364 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 DDX6P26196 483 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 OCA2Q04671 838 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 SELENBP1Q13228 472 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 CAMK1Q14012 370 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 CARD16Q5EG05 197 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 SCRN2Q96FV2 425 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 RAD21L1Q9H4I0 556 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 PCTPQ9UKL6 214 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 GBF1Q92538 1859 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 XIRP2A4UGR9 3374 aa16.72■□□□□ 0.27
SHKBP1-205ENST00000594973 MYO1DO94832 1006 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 HSPA8P11142 646 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 TGM1P22735 817 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 LHCGRP22888 699 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 IDUAP35475 653 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 HPCAL1P37235 193 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 ARL1P40616 181 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 KIF19Q2TAC6 998 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 C18orf21Q32NC0 220 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 PSRC1Q6PGN9 363 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 USP45Q70EL2 814 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 ANKRD13BQ86YJ7 626 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 S100ZQ8WXG8 99 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 TUBGCP3Q96CW5 907 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 NRBF2Q96F24 287 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 PCDHAC1Q9H158 963 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 SIAEQ9HAT2 523 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 TNFRSF10AO00220 468 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 STX16O14662 325 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 KLK8O60259 260 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 FGF19O95750 216 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 MATN1P21941 496 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 TCEA1P23193 301 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 PTSQ03393 145 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 STX5Q13190 355 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 GRB7Q14451 532 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 TMEM215Q68D42 235 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 TPRG1Q6ZUI0 275 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 SYVN1Q86TM6 617 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 ADIPOR2Q86V24 386 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 C7orf61Q8IZ16 206 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 CBR4Q8N4T8 237 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 ABHD11Q8NFV4 315 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 CYB5D2Q8WUJ1 264 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 ISG20Q96AZ6 181 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 C9orf16Q9BUW7 83 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 PKD2L2Q9NZM6 624 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 CD300AQ9UGN4 299 aa16.71■□□□□ 0.27
SHKBP1-205ENST00000594973 TRANK1O15050 2925 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 E7ENX8 843 aa16.7■□□□□ 0.26
SHKBP1-205ENST00000594973 GMNNO75496 209 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms