RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 XKR5Q6UX68 686 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 ATG14Q6ZNE5 492 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 GCNT7Q6ZNI0 430 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 UBE2R2Q712K3 238 aaPredicted RBP13.15□□□□□ -0.3
VMP1-217ENST00000593168 ABI3BPQ7Z7G0 1075 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 LSMEM2Q8N112 164 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 FRMD1Q8N878 549 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 CCDC197Q8NCU1 140 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 CADM4Q8NFZ8 388 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 FAM174AQ8TBP5 190 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 PIWIL2Q8TC59 973 aaKnown RBP13.15□□□□□ -0.3
VMP1-217ENST00000593168 RLN3Q8WXF3 142 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 SEC16BQ96JE7 1060 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 HIST1H2AHQ96KK5 128 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 FOPNLQ96NB1 174 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 HIST1H2AJQ99878 128 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 MYOCQ99972 504 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 SIKE1Q9BRV8 207 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 TIMM29Q9BSF4 260 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 H2AFJQ9BTM1 129 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 ILKAPQ9H0C8 392 aaPredicted RBP13.15□□□□□ -0.3
VMP1-217ENST00000593168 GSTO2Q9H4Y5 243 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 EBF2Q9HAK2 575 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 UTP6Q9NYH9 597 aaKnown RBP13.15□□□□□ -0.3
VMP1-217ENST00000593168 TSR3Q9UJK0 312 aaKnown RBP13.15□□□□□ -0.3
VMP1-217ENST00000593168 PDE10AQ9Y233 779 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.15□□□□□ -0.3
VMP1-217ENST00000593168 RAP2CQ9Y3L5 183 aa13.15□□□□□ -0.3
VMP1-217ENST00000593168 PCYT1BQ9Y5K3 369 aaPredicted RBP13.15□□□□□ -0.3
VMP1-217ENST00000593168 TNPO3Q9Y5L0 923 aaKnown RBP13.15□□□□□ -0.3
VMP1-217ENST00000593168 DSPP15924 2871 aaKnown RBP13.15□□□□□ -0.3
VMP1-217ENST00000593168 A0A1W2PPC4 97 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 METTL12A8MUP2 240 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 TNFRSF10CO14798 259 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 NDUFS2O75306 463 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 CATP04040 527 aaKnown RBP13.14□□□□□ -0.31
VMP1-217ENST00000593168 FUCA1P04066 466 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 RPS17P08708 135 aaKnown RBP13.14□□□□□ -0.31
VMP1-217ENST00000593168 ANXA5P08758 320 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 PDHA2P29803 388 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 RABIFP47224 123 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 PREPP48147 710 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 RPIAP49247 311 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 HK2P52789 917 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 AP1S2P56377 157 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 OVGP1Q12889 678 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 ABRQ12979 859 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 NFE2L1Q14494 772 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 PHKG1Q16816 387 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 PYCR3Q53H96 274 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 METRNLQ641Q3 311 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 FRMD7Q6ZUT3 714 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 WDR75Q8IWA0 830 aaKnown RBP13.14□□□□□ -0.31
VMP1-217ENST00000593168 CACNA2D3Q8IZS8 1091 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 KIRREL3Q8IZU9 778 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 TCAIMQ8N3R3 496 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 LILRA3Q8N6C8 439 aaPredicted RBP13.14□□□□□ -0.31
VMP1-217ENST00000593168 FBXO15Q8NCQ5 510 aaPredicted RBP13.14□□□□□ -0.31
VMP1-217ENST00000593168 MCOLN3Q8TDD5 553 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 SKA2Q8WVK7 121 aaPredicted RBP13.14□□□□□ -0.31
VMP1-217ENST00000593168 MOCOSQ96EN8 888 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 WDR92Q96MX6 357 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 EML4Q9HC35 981 aaKnown RBP13.14□□□□□ -0.31
VMP1-217ENST00000593168 TMEM74BQ9NUR3 256 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 SLC23A2Q9UGH3 650 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 ZNHIT2Q9UHR6 403 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 PTBP2Q9UKA9 531 aaKnown RBP13.14□□□□□ -0.31
VMP1-217ENST00000593168 KLK13Q9UKR3 277 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 ACSL5Q9ULC5 683 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 LHX6Q9UPM6 363 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 DNAJC16Q9Y2G8 782 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 LAMA5O15230 3695 aa13.14□□□□□ -0.31
VMP1-217ENST00000593168 PI4KAP42356 2102 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 ANKRD12Q6UB98 2062 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 PABPN1LA6NDY0 278 aaKnown RBP13.13□□□□□ -0.31
VMP1-217ENST00000593168 NCF1BA6NI72 391 aaPredicted RBP13.13□□□□□ -0.31
VMP1-217ENST00000593168 NCF1CA8MVU1 366 aaPredicted RBP13.13□□□□□ -0.31
VMP1-217ENST00000593168 SLCO1B7G3V0H7 640 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 SIX3O95343 332 aaPredicted RBP13.13□□□□□ -0.31
VMP1-217ENST00000593168 CHRNGP07510 517 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 NCF1P14598 390 aaPredicted RBP13.13□□□□□ -0.31
VMP1-217ENST00000593168 MAP4P27816 1152 aaKnown RBP13.13□□□□□ -0.31
VMP1-217ENST00000593168 ACADLP28330 430 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 EEF1DP29692 281 aaKnown RBP13.13□□□□□ -0.31
VMP1-217ENST00000593168 HNMTP50135 292 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 RPL14P50914 215 aaKnown RBP13.13□□□□□ -0.31
VMP1-217ENST00000593168 TRIM61Q5EBN2 209 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 ENPP7Q6UWV6 458 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 SLC36A4Q6YBV0 504 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 FAM83HQ6ZRV2 1179 aaPredicted RBP13.13□□□□□ -0.31
VMP1-217ENST00000593168 ARMCX6Q7L4S7 300 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 GALNT13Q8IUC8 556 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 TMEFF1Q8IYR6 380 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 ANKS4BQ8N8V4 417 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 OR56A4Q8NGH8 313 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 UBTD2Q8WUN7 234 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 RHBDF1Q96CC6 855 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 EGFL8Q99944 293 aa13.13□□□□□ -0.31
VMP1-217ENST00000593168 PLCD4Q9BRC7 762 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms