RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 FILIP1LQ4L180 1135 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 SPDYCQ5MJ68 293 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 HECTD3Q5T447 861 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 TEDDM1Q5T9Z0 273 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 LPCAT2Q7L5N7 544 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 SIX6OS1Q8N1H7 587 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 WDTC1Q8N5D0 677 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 SLC20A1Q8WUM9 679 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 GLMPQ8WWB7 406 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 WBP2Q969T9 261 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 PIWIL1Q96J94 861 aaKnown RBP7.72□□□□□ -1.17
ATG4D-210ENST00000588972 UBXN6Q9BZV1 441 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 MIS12Q9H081 205 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 CDCP1Q9H5V8 836 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 BRF2Q9HAW0 419 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 LRRC4Q9HBW1 653 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.72□□□□□ -1.17
ATG4D-210ENST00000588972 PPP1R14DQ9NXH3 145 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 IFNKQ9P0W0 207 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 SUFUQ9UMX1 484 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 PSAT1Q9Y617 370 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 COPG1Q9Y678 874 aaKnown RBP7.72□□□□□ -1.17
ATG4D-210ENST00000588972 WNT6Q9Y6F9 365 aa7.72□□□□□ -1.17
ATG4D-210ENST00000588972 E5RJQ4 531 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 PSMA4P25789 261 aaKnown RBP7.71□□□□□ -1.18
ATG4D-210ENST00000588972 KRT20P35900 424 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 P2RY2P41231 377 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 PTGER3P43115 390 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 ATXN3P54252 364 aaPredicted RBP7.71□□□□□ -1.18
ATG4D-210ENST00000588972 UBASH3AP57075 661 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 NXPH1P58417 271 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 DAOAP59103 153 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 YWHAGP61981 247 aaKnown RBP eCLIP7.71□□□□□ -1.18
ATG4D-210ENST00000588972 SLC7A9P82251 487 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 CDK18Q07002 472 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 EFEMP1Q12805 493 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 C10orf120Q5SQS8 335 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 LYSMD4Q5XG99 296 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 WDR93Q6P2C0 686 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 RABEPKQ7Z6M1 372 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 HDDC3Q8N4P3 179 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 POU5F2Q8N7G0 328 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 OR52L2PQ8NGH6 319 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 RNFT2Q96EX2 444 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 SPAG5Q96R06 1193 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 CPXM1Q96SM3 734 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 NACA2Q9H009 215 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 THAP1Q9NVV9 213 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 BEX4Q9NWD9 120 aaPredicted RBP7.71□□□□□ -1.18
ATG4D-210ENST00000588972 DKK2Q9UBU2 259 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 RASAL2Q9UJF2 1139 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 NOCTQ9UK39 431 aaKnown RBP7.71□□□□□ -1.18
ATG4D-210ENST00000588972 SH2B3Q9UQQ2 575 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 PCDH15Q96QU1 1955 aa7.71□□□□□ -1.18
ATG4D-210ENST00000588972 ATXN2Q99700 1313 aaKnown RBP7.71□□□□□ -1.18
ATG4D-210ENST00000588972 LRRC53A6NM62 1247 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 K7EQS6 105 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 PAPSS1O43252 624 aaPredicted RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 FAM20BO75063 409 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 HMBSP08397 361 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 LYL1P12980 280 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 ZNF37AP17032 561 aaPredicted RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 CHRNB2P17787 502 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 ZFP36P26651 326 aaKnown RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 CXCR5P32302 372 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 ACTN2P35609 894 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 OPRD1P41143 372 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 RPL34P49207 117 aaKnown RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 CDH15P55291 814 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 SUMO2P61956 95 aaKnown RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 MRPS21P82921 87 aaKnown RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 E2F1Q01094 437 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 MAMLD1Q13495 774 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 BYSLQ13895 437 aaKnown RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 HNRNPDQ14103 355 aaKnown RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 PTPN20Q4JDL3 420 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 SOWAHCQ53LP3 525 aaPredicted RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 C2CD6Q53TS8 623 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 PM20D1Q6GTS8 502 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 FAM183BPQ6ZVS7 135 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 KRT77Q7Z794 578 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 ADGRG6Q86SQ4 1221 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 CHCHD4Q8N4Q1 142 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 ZNF366Q8N895 744 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 PNPLA1Q8N8W4 532 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 RFWD2Q8NHY2 731 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 CEP76Q8TAP6 659 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 PPP1R13BQ96KQ4 1090 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 HSFY1Q96LI6 401 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 ELOVL1Q9BW60 279 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 XPO4Q9C0E2 1151 aaKnown RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 LINC00597Q9H2U6 94 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 CNGB3Q9NQW8 809 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 EIF2B3Q9NR50 452 aaKnown RBP7.7□□□□□ -1.18
ATG4D-210ENST00000588972 PLSCR4Q9NRQ2 329 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 ALKBH4Q9NXW9 302 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 DKK3Q9UBP4 350 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 PILRBQ9UKJ0 227 aa7.7□□□□□ -1.18
ATG4D-210ENST00000588972 MYOFQ9NZM1 2061 aa7.69□□□□□ -1.18
ATG4D-210ENST00000588972 GAGE10A6NGK3 116 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms