RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 METTL2BQ6P1Q9 378 aaKnown RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 TTC23LQ6PF05 361 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 HID1Q8IV36 788 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 ANKS4BQ8N8V4 417 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 MFSD2AQ8NA29 543 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 FBXO15Q8NCQ5 510 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 CCDC197Q8NCU1 140 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 SPDYE1Q8NFV5 336 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 AGR3Q8TD06 166 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 MAGEC3Q8TD91 643 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 ZNF483Q8TF39 744 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 UBTD2Q8WUN7 234 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 ATL1Q8WXF7 558 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 CCDC138Q96M89 665 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 CD244Q9BZW8 370 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 ZDHHC5Q9C0B5 715 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 DCTN4Q9UJW0 460 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 PIEZO1Q92508 2521 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 MYO15AQ9UKN7 3530 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 DMDP11532 3685 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 SPTY2D1-AS1A0A0U1RR47 76 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 E2F3O00716 465 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 TNFP01375 233 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 TSPAN8P19075 237 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 MPSTP25325 297 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 MAOBP27338 520 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 CD38P28907 300 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 RACK1P63244 317 aaKnown RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 LCP2Q13094 533 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 WDR5BQ86VZ2 330 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 RFWD2Q8NHY2 731 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 TRPC4APQ8TEL6 797 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 TFGQ92734 400 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 NSUN5Q96P11 429 aaKnown RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 SIKE1Q9BRV8 207 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 HGH1Q9BTY7 390 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 DUSP15Q9H1R2 295 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 SEMA4BQ9NPR2 832 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-209ENST00000588857 GPR27Q9NS67 375 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 OPTCQ9UBM4 332 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 HAO1Q9UJM8 370 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 SLCO1B1Q9Y6L6 691 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 DGKBQ9Y6T7 804 aa21.7■■□□□ 1.06
ATG4D-209ENST00000588857 FANCMQ8IYD8 2048 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 CCNT2O60583 730 aaKnown RBP21.69■■□□□ 1.06
ATG4D-209ENST00000588857 STK16O75716 305 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 MLYCDO95822 493 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 HK2P52789 917 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 CUZD1Q86UP6 607 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 IQCHQ86VS3 1027 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 KIRREL3Q8IZU9 778 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 FBXL8Q96CD0 374 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 RMDN2Q96LZ7 410 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 TMEM79Q9BSE2 394 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 TRNAU1APQ9NX07 287 aaKnown RBP21.69■■□□□ 1.06
ATG4D-209ENST00000588857 ZDHHC2Q9UIJ5 367 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 ARL2BPQ9Y2Y0 163 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 ASB1Q9Y576 335 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 ANGPTL3Q9Y5C1 460 aa21.69■■□□□ 1.06
ATG4D-209ENST00000588857 A0A0G2JND7 137 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 PRR19A6NJB7 356 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 PDZK1P1A8MUH7 402 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 TDGF1P13385 188 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 GGT5P36269 586 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 CTBSQ01459 385 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 GTF2H2Q13888 395 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 FZD2Q14332 565 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 RBBP7Q16576 425 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 WDR45BQ5MNZ6 344 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 SH2D4BQ5SQS7 431 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 GTF2H2CQ6P1K8 395 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 ZC3H14Q6PJT7 736 aaKnown RBP21.68■■□□□ 1.06
ATG4D-209ENST00000588857 LPCAT2Q7L5N7 544 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 LONP2Q86WA8 852 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 RGL4Q8IZJ4 473 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 AFAP1L2Q8N4X5 818 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 NELL1Q92832 810 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 PKP4Q99569 1192 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 MID1IP1Q9NPA3 183 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 PNMA8BQ9ULN7 279 aaPredicted RBP21.68■■□□□ 1.06
ATG4D-209ENST00000588857 USH1CQ9Y6N9 552 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 R4GN57 208 aa21.68■■□□□ 1.06
ATG4D-209ENST00000588857 TDRD6O60522 2096 aaKnown RBP21.67■■□□□ 1.06
ATG4D-209ENST00000588857 SLCO1B7G3V0H7 640 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 UBFD1O14562 309 aaKnown RBP21.67■■□□□ 1.06
ATG4D-209ENST00000588857 GIPC1O14908 333 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 PIK3CGP48736 1102 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 CCSMST1Q4G0I0 132 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 CAPRIN2Q6IMN6 1127 aaKnown RBP21.67■■□□□ 1.06
ATG4D-209ENST00000588857 GOLGA7Q7Z5G4 137 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 DCUN1D3Q8IWE4 304 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 TEX9Q8N6V9 391 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 PHC3Q8NDX5 983 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 C12orf66Q96MD2 445 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 TMEM168Q9H0V1 697 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 TRIT1Q9H3H1 467 aaKnown RBP21.67■■□□□ 1.06
ATG4D-209ENST00000588857 TM9SF3Q9HD45 589 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 WDR37Q9Y2I8 494 aa21.67■■□□□ 1.06
ATG4D-209ENST00000588857 KRT87PA6NCN2 255 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms