RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 ZNF761Q86XN6 746 aaPredicted RBP19.65■□□□□ 0.74
ATG4D-208ENST00000588667 ASZ1Q8WWH4 475 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 GFM1Q96RP9 751 aaKnown RBP19.65■□□□□ 0.74
ATG4D-208ENST00000588667 SCNM1Q9BWG6 230 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 CCDC68Q9H2F9 335 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 SNX15Q9NRS6 342 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 PCMTD2Q9NV79 361 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 HEBP2Q9Y5Z4 205 aa19.65■□□□□ 0.74
ATG4D-208ENST00000588667 IGHV1OR21-1A0A087WYE8 117 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 D6RAR5 112 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 KPNA5O15131 536 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 CASC3O15234 703 aaKnown RBP19.64■□□□□ 0.73
ATG4D-208ENST00000588667 B4GAT1O43505 415 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 HAUS5O94927 633 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 MT-CO3P00414 261 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 MPOP05164 745 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 F7P08709 466 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-208ENST00000588667 MAGEA12P43365 314 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 ABCG1P45844 678 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 SHC2P98077 582 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 CLPPQ16740 277 aaPredicted RBP19.64■□□□□ 0.73
ATG4D-208ENST00000588667 NAPRTQ6XQN6 538 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 RBM44Q6ZP01 1051 aaKnown RBP19.64■□□□□ 0.73
ATG4D-208ENST00000588667 DCBLD1Q8N8Z6 715 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 TCP10LQ8TDR4 215 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 DENND1AQ8TEH3 1009 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 DEPDC7Q96QD5 511 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 SLC39A10Q9ULF5 831 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 CFAP20Q9Y6A4 193 aaKnown RBP19.64■□□□□ 0.73
ATG4D-208ENST00000588667 COMMD10Q9Y6G5 202 aa19.64■□□□□ 0.73
ATG4D-208ENST00000588667 NIPSNAP2O75323 286 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 GPC4O75487 556 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 JUPP14923 745 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 LSP1P33241 339 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 FOXK2Q01167 660 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 HSPA14Q0VDF9 509 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 GPR18Q14330 331 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 USP10Q14694 798 aaKnown RBP19.63■□□□□ 0.73
ATG4D-208ENST00000588667 TERF2Q15554 542 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 OTOAQ7RTW8 1153 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 OR10G6Q8NH81 332 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 EPB41L1Q9H4G0 881 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 KLK13Q9UKR3 277 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 CORO1CQ9ULV4 474 aaPredicted RBP19.63■□□□□ 0.73
ATG4D-208ENST00000588667 CDYLQ9Y232 598 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 NEUROG3Q9Y4Z2 214 aa19.63■□□□□ 0.73
ATG4D-208ENST00000588667 PRAMEF33A0A0G2JMD5 474 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 FAM95CA0A1B0GW59 222 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 FAM221BA6H8Z2 402 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 E5RI56 91 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 CPNE6O95741 557 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 NDUFS1P28331 727 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 CRHR1P34998 444 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 SQSTM1Q13501 440 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 AMZ1Q400G9 498 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 HHATQ5VTY9 493 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 DUS1LQ6P1R4 473 aaKnown RBP19.62■□□□□ 0.73
ATG4D-208ENST00000588667 CNSTQ6PJW8 725 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 TAX1BP1Q86VP1 789 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 SLC22A15Q8IZD6 547 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 ZFPM2Q8WW38 1151 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 DCDC2Q9UHG0 476 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 ANGPTL2Q9UKU9 493 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 COLEC10Q9Y6Z7 277 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 KIF26BQ2KJY2 2108 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 DUX1O43812 170 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 GLRA3O75311 464 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 SLCO2B1O94956 709 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 SPINK2P20155 84 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 CHRM3P20309 590 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 CD1CP29017 333 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 SLC12A2P55011 1212 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 POU4F1Q01851 419 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 PLEKHS1Q5SXH7 462 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 ZNF549Q6P9A3 640 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 CMC1Q7Z7K0 106 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 GPATCH11Q8N954 259 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 TFGQ92734 400 aaPredicted RBP19.62■□□□□ 0.73
ATG4D-208ENST00000588667 KCNJ9Q92806 393 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 AHCYL2Q96HN2 611 aaKnown RBP19.62■□□□□ 0.73
ATG4D-208ENST00000588667 ELMO2Q96JJ3 720 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 TBC1D10AQ9BXI6 508 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 KIR3DX1Q9H7L2 352 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 MLXIPLQ9NP71 852 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 LATS2Q9NRM7 1088 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 TLK1Q9UKI8 766 aa19.62■□□□□ 0.73
ATG4D-208ENST00000588667 ATXN7L1Q9ULK2 861 aaPredicted RBP19.62■□□□□ 0.73
ATG4D-208ENST00000588667 A0A096LPK6 155 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 FAM149AA5PLN7 773 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 SRRM3A6NNA2 597 aaPredicted RBP19.61■□□□□ 0.73
ATG4D-208ENST00000588667 STMN1P16949 149 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 ACADLP28330 430 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 WDR4P57081 412 aaKnown RBP19.61■□□□□ 0.73
ATG4D-208ENST00000588667 KRT33BQ14525 404 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 TAF1BQ53T94 588 aaPredicted RBP19.61■□□□□ 0.73
ATG4D-208ENST00000588667 RAPH1Q70E73 1250 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 PIM3Q86V86 326 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 TSPAN17Q96FV3 270 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 DPYSL5Q9BPU6 564 aa19.61■□□□□ 0.73
ATG4D-208ENST00000588667 PAIP2Q9BPZ3 127 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms