RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 KYNUQ16719 465 aa19.61■□□□□ 0.73
DDX39A-207ENST00000588542 FAM92BQ6ZTR7 304 aa19.61■□□□□ 0.73
DDX39A-207ENST00000588542 ZC3HC1Q86WB0 502 aaKnown RBP19.61■□□□□ 0.73
DDX39A-207ENST00000588542 AMIGO1Q86WK6 493 aa19.61■□□□□ 0.73
DDX39A-207ENST00000588542 DCUN1D3Q8IWE4 304 aa19.61■□□□□ 0.73
DDX39A-207ENST00000588542 ADGRF3Q8IZF5 1079 aa19.61■□□□□ 0.73
DDX39A-207ENST00000588542 KDF1Q8NAX2 398 aaPredicted RBP19.61■□□□□ 0.73
DDX39A-207ENST00000588542 AGBL5Q8NDL9 886 aa19.61■□□□□ 0.73
DDX39A-207ENST00000588542 RHOXF2Q9BQY4 288 aa19.61■□□□□ 0.73
DDX39A-207ENST00000588542 MTRF1LQ9UGC7 380 aaKnown RBP19.61■□□□□ 0.73
DDX39A-207ENST00000588542 PLAGL1Q9UM63 463 aa19.61■□□□□ 0.73
DDX39A-207ENST00000588542 LAMA5O15230 3695 aa19.61■□□□□ 0.73
DDX39A-207ENST00000588542 PCM1Q15154 2024 aa19.61■□□□□ 0.73
DDX39A-207ENST00000588542 ACACAQ13085 2346 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 TMEM8BA6NDV4 472 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 TOX3O15405 576 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-207ENST00000588542 RPN2P04844 631 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 FGF3P11487 239 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-207ENST00000588542 KPNA2P52292 529 aaKnown RBP19.6■□□□□ 0.73
DDX39A-207ENST00000588542 PGGT1BP53609 377 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 TTLL9Q3SXZ7 439 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 CCSMST1Q4G0I0 132 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 UBAP2Q5T6F2 1119 aaKnown RBP19.6■□□□□ 0.73
DDX39A-207ENST00000588542 HECTD2Q5U5R9 776 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 CYHR1Q6ZMK1 362 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 NEK10Q6ZWH5 1172 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 PRSS42Q7Z5A4 293 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 RELL1Q8IUW5 271 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 CPNE9Q8IYJ1 553 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 SKA2Q8WVK7 121 aaPredicted RBP19.6■□□□□ 0.73
DDX39A-207ENST00000588542 FMO2Q99518 471 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 OLFM1Q99784 485 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 OCIAD1Q9NX40 245 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 NSMCE4AQ9NXX6 385 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 TAS2R13Q9NYV9 303 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 PISDQ9UG56 409 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 CIDEBQ9UHD4 219 aa19.6■□□□□ 0.73
DDX39A-207ENST00000588542 IGHV5-51A0A0C4DH38 117 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 CDRT15L2A8MXV6 281 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 PSIP1O75475 530 aaKnown RBP19.59■□□□□ 0.73
DDX39A-207ENST00000588542 TNFSF15O95150 251 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 MPC1LP0DKB6 136 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 CBSLP0DN79 551 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 FDXRP22570 491 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 MCM3P25205 808 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 CSTF2P33240 577 aaKnown RBP eCLIP19.59■□□□□ 0.73
DDX39A-207ENST00000588542 SHMT2P34897 504 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 CBSP35520 551 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 BDKRB1P46663 353 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 DNTTIP2Q5QJE6 756 aaKnown RBP19.59■□□□□ 0.73
DDX39A-207ENST00000588542 CACHD1Q5VU97 1274 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 FAM45BPQ6NSW5 357 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 UGT3A1Q6NUS8 523 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 PAQR3Q6TCH7 311 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 RASGRP3Q8IV61 690 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 LSMEM2Q8N112 164 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 BMPERQ8N8U9 685 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 GPATCH11Q8N954 259 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 FAM45AQ8TCE6 357 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 FBF1Q8TES7 1133 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 ZCCHC14Q8WYQ9 949 aaKnown RBP19.59■□□□□ 0.73
DDX39A-207ENST00000588542 KLHL6Q8WZ60 621 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 PPM1MQ96MI6 270 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 CD180Q99467 661 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 MAP3K3Q99759 626 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 ZNF768Q9H5H4 540 aaKnown RBP19.59■□□□□ 0.73
DDX39A-207ENST00000588542 NINJ2Q9NZG7 142 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 AKAP7Q9P0M2 348 aaPredicted RBP19.59■□□□□ 0.73
DDX39A-207ENST00000588542 TRMT6Q9UJA5 497 aaKnown RBP19.59■□□□□ 0.73
DDX39A-207ENST00000588542 POMT2Q9UKY4 750 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 VWA7Q9Y334 891 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 ANKRD11Q6UB99 2663 aaPredicted RBP19.59■□□□□ 0.73
DDX39A-207ENST00000588542 USP24Q9UPU5 2620 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 ZZEF1O43149 2961 aa19.59■□□□□ 0.73
DDX39A-207ENST00000588542 KRT87PA6NCN2 255 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 TAF4O00268 1085 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 TLX3O43711 291 aaPredicted RBP19.58■□□□□ 0.72
DDX39A-207ENST00000588542 SPAG6O75602 509 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 RASSF9O75901 435 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 ITGA2BP08514 1039 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 JMJD7P0C870 316 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 ENO3P13929 434 aaPredicted RBP19.58■□□□□ 0.72
DDX39A-207ENST00000588542 PKLRP30613 574 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 SKIV2L2P42285 1042 aaKnown RBP19.58■□□□□ 0.72
DDX39A-207ENST00000588542 MLLT3P42568 568 aaPredicted RBP19.58■□□□□ 0.72
DDX39A-207ENST00000588542 TBC1D25Q3MII6 688 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 KBTBD12Q3ZCT8 623 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 ARMC6Q6NXE6 501 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 IFT20Q8IY31 132 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 LMNTD1Q8N9Z9 388 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 LINC01555Q8NAE3 123 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 EEF1AKMT1Q8WVE0 214 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 CDKL2Q92772 493 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 FOPNLQ96NB1 174 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 IL17FQ96PD4 163 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 TSPYL1Q9H0U9 437 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 RHOJQ9H4E5 214 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 SIDT1Q9NXL6 827 aaKnown RBP19.58■□□□□ 0.72
DDX39A-207ENST00000588542 NFU1Q9UMS0 254 aa19.58■□□□□ 0.72
DDX39A-207ENST00000588542 FAM95CA0A1B0GW59 222 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms