RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-223	ENST00000588516	SLC30A3	Q99726	388 aa		13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	RBM4B	Q9BQ04	359 aa	Known RBP	13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	RBM4	Q9BWF3	364 aa	Known RBP	13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	CXorf21	Q9HAI6	301 aa		13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	LRTM1	Q9HBL6	345 aa		13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	C1orf109	Q9NX04	203 aa		13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	SMPD4	Q9NXE4	827 aa		13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	USE1	Q9NZ43	259 aa		13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	DNMT3B	Q9UBC3	853 aa	Known RBP	13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	SNX6	Q9UNH7	406 aa		13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	POLR3H	Q9Y535	204 aa	Predicted RBP	13.76	□□□□□ -0.21
NEDD4L-223	ENST00000588516	ZFC3H1	O60293	1989 aa	Known RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	ELOVL7	A1L3X0	281 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	SERTM1	A2A2V5	107 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	FAM149A	A5PLN7	773 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	DLGAP1	O14490	977 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	GNGT2	O14610	69 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	STK16	O75716	305 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	SLC25A14	O95258	325 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	CLDN9	O95484	217 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	EFEMP2	O95967	443 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	TRBC1	P01850	177 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	HIST1H2AD	P20671	130 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	HRH2	P25021	359 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	DCK	P27707	260 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	IL12A	P29459	219 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	PRDX3	P30048	256 aa	Known RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	OXTR	P30559	389 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	HNMT	P50135	292 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	ARSF	P54793	590 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	TMBIM6	P55061	237 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	TPD52	P55327	224 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	CYP4F3	Q08477	520 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	TRAF3	Q13114	568 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	DPY19L1	Q2PZI1	675 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	GGTA1P	Q4G0N0	100 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	MPPE1	Q53F39	396 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	LRRC70	Q7Z2Q7	622 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	LYSMD3	Q7Z3D4	306 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	THAP5	Q7Z6K1	395 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	GPR180	Q86V85	440 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	HIPK1	Q86Z02	1210 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	FAM217A	Q8IXS0	508 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	EID3	Q8N140	333 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	TMEM132C	Q8N3T6	1108 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	ZNF557	Q8N988	423 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	OR52B6	Q8NGF0	335 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	STARD8	Q92502	1023 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	HDAC2	Q92769	488 aa	Known RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	ATOH1	Q92858	354 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	ITCH	Q96J02	903 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	HIST1H2AH	Q96KK5	128 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	LYSMD1	Q96S90	227 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	SEPHS2	Q99611	448 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	DOK1	Q99704	481 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	HIST1H2AJ	Q99878	128 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	H2AFJ	Q9BTM1	129 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	THUMPD3	Q9BV44	507 aa	Known RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	NPL	Q9BXD5	320 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	RPF2	Q9H7B2	306 aa	Known RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	RAD18	Q9NS91	495 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	CLDND1	Q9NY35	253 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	IFT80	Q9P2H3	777 aa	Predicted RBP	13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	ZNHIT2	Q9UHR6	403 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	VPS51	Q9UID3	782 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	OR51B4	Q9Y5P0	310 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	AP1M2	Q9Y6Q5	423 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516	TECTA	O75443	2155 aa		13.75	□□□□□ -0.21
NEDD4L-223	ENST00000588516		A0A096LPI6	279 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	C1orf232	A0A0U1RR37	186 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	TMEM221	A6NGB7	291 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	FAM220BP	B1ANY3	271 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	NPIPB8	E9PQR5	432 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516		G3V2T6	193 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516		M0R296	226 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	MANBA	O00462	879 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	ANKRD28	O15084	1053 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	PRMT3	O60678	531 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	NBN	O60934	754 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	SEC22B	O75396	215 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	SOD2	P04179	222 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	OR56A5	P0C7T3	313 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	MPC1L	P0DKB6	136 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	IRF1	P10914	325 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	CDK4	P11802	303 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	NCK1	P16333	377 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	PRPH2	P23942	346 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	GGT5	P36269	586 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	MAPK9	P45984	424 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	ARHGDIA	P52565	204 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	RAD23A	P54725	363 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	OR4D2	P58180	307 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	SNRPD1	P62314	119 aa	Known RBP	13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	SP140	Q13342	867 aa		13.74	□□□□□ -0.21
NEDD4L-223	ENST00000588516	RUNDC3A	Q59EK9	446 aa		13.74	□□□□□ -0.21

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