RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 HIST1H2ADP20671 130 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 ACTR1BP42025 376 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 MAPK9P45984 424 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 HSPA7P48741 367 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 CDH13P55290 713 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 AP1S2P56377 157 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 ACTR1AP61163 376 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 C1orf61Q13536 156 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 RCN2Q14257 317 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 PCBP2Q15366 365 aaKnown RBP eCLIP11.01□□□□□ -0.65
VMP1-207ENST00000588131 UAP1L1Q3KQV9 507 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 PRAMEF14Q5SWL7 426 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 FAM219BQ5XKK7 198 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 SULT1C3Q6IMI6 304 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 FRMD7Q6ZUT3 714 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 CEP68Q76N32 757 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 LMNTD1Q8N9Z9 388 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 ZBTB44Q8NCP5 570 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 FBXO15Q8NCQ5 510 aaPredicted RBP11.01□□□□□ -0.65
VMP1-207ENST00000588131 MCOLN3Q8TDD5 553 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 GPBAR1Q8TDU6 330 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 ZNF483Q8TF39 744 aaPredicted RBP11.01□□□□□ -0.65
VMP1-207ENST00000588131 UBTD2Q8WUN7 234 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 FBXL8Q96CD0 374 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 HIST1H2AHQ96KK5 128 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 C12orf66Q96MD2 445 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 C7orf26Q96N11 449 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 HIST1H2AJQ99878 128 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 H2AFJQ9BTM1 129 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 LRRC61Q9BV99 259 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 C1QTNF3Q9BXJ4 246 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 TRIM54Q9BYV2 358 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 PITPNM3Q9BZ71 974 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 SHCBP1LQ9BZQ2 653 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 FAM107BQ9H098 131 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 THAP1Q9NVV9 213 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 DNAJC28Q9NX36 388 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 ZSCAN32Q9NX65 697 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 WWOXQ9NZC7 414 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 APOBEC3BQ9UH17 382 aaKnown RBP11.01□□□□□ -0.65
VMP1-207ENST00000588131 PCTPQ9UKL6 214 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 PLAGL1Q9UM63 463 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 ASF1AQ9Y294 204 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 FANCMQ8IYD8 2048 aa11.01□□□□□ -0.65
VMP1-207ENST00000588131 PRAMEF33A0A0G2JMD5 474 aa11□□□□□ -0.65
VMP1-207ENST00000588131 A0A1B0GTW7 788 aa11□□□□□ -0.65
VMP1-207ENST00000588131 A0A1B0GVT2 93 aa11□□□□□ -0.65
VMP1-207ENST00000588131 PABPN1LA6NDY0 278 aaKnown RBP11□□□□□ -0.65
VMP1-207ENST00000588131 MYO1CO00159 1063 aa11□□□□□ -0.65
VMP1-207ENST00000588131 TNFRSF10AO00220 468 aa11□□□□□ -0.65
VMP1-207ENST00000588131 E2F3O00716 465 aa11□□□□□ -0.65
VMP1-207ENST00000588131 PPP6CO00743 305 aa11□□□□□ -0.65
VMP1-207ENST00000588131 HSPA4LO95757 839 aa11□□□□□ -0.65
VMP1-207ENST00000588131 CTSEP14091 401 aa11□□□□□ -0.65
VMP1-207ENST00000588131 MPSTP25325 297 aa11□□□□□ -0.65
VMP1-207ENST00000588131 IMPA1P29218 277 aa11□□□□□ -0.65
VMP1-207ENST00000588131 CNR2P34972 360 aa11□□□□□ -0.65
VMP1-207ENST00000588131 GDF5P43026 501 aa11□□□□□ -0.65
VMP1-207ENST00000588131 AFF3P51826 1226 aaKnown RBP11□□□□□ -0.65
VMP1-207ENST00000588131 C21orf59P57076 290 aa11□□□□□ -0.65
VMP1-207ENST00000588131 BNC1Q01954 994 aa11□□□□□ -0.65
VMP1-207ENST00000588131 SF3A3Q12874 501 aaKnown RBP eCLIP11□□□□□ -0.65
VMP1-207ENST00000588131 ILF3Q12906 894 aaKnown RBP eCLIP11□□□□□ -0.65
VMP1-207ENST00000588131 PRKG2Q13237 762 aa11□□□□□ -0.65
VMP1-207ENST00000588131 RPE65Q16518 533 aa11□□□□□ -0.65
VMP1-207ENST00000588131 ARL13AQ5H913 290 aaPredicted RBP11□□□□□ -0.65
VMP1-207ENST00000588131 CFAP157Q5JU67 520 aa11□□□□□ -0.65
VMP1-207ENST00000588131 CDKL4Q5MAI5 379 aa11□□□□□ -0.65
VMP1-207ENST00000588131 ANKS6Q68DC2 871 aa11□□□□□ -0.65
VMP1-207ENST00000588131 ABRAXAS1Q6UWZ7 409 aa11□□□□□ -0.65
VMP1-207ENST00000588131 WASH2PQ6VEQ5 465 aa11□□□□□ -0.65
VMP1-207ENST00000588131 DCUN1D3Q8IWE4 304 aa11□□□□□ -0.65
VMP1-207ENST00000588131 SFTPA2Q8IWL1 248 aa11□□□□□ -0.65
VMP1-207ENST00000588131 THOC1Q96FV9 657 aaKnown RBP11□□□□□ -0.65
VMP1-207ENST00000588131 ZC3H10Q96K80 434 aaKnown RBP11□□□□□ -0.65
VMP1-207ENST00000588131 CNDP1Q96KN2 507 aa11□□□□□ -0.65
VMP1-207ENST00000588131 CCDC138Q96M89 665 aa11□□□□□ -0.65
VMP1-207ENST00000588131 FERD3LQ96RJ6 166 aa11□□□□□ -0.65
VMP1-207ENST00000588131 NRTNQ99748 197 aa11□□□□□ -0.65
VMP1-207ENST00000588131 HGH1Q9BTY7 390 aa11□□□□□ -0.65
VMP1-207ENST00000588131 GSDMCQ9BYG8 508 aa11□□□□□ -0.65
VMP1-207ENST00000588131 CD244Q9BZW8 370 aa11□□□□□ -0.65
VMP1-207ENST00000588131 ATG10Q9H0Y0 220 aa11□□□□□ -0.65
VMP1-207ENST00000588131 ZBTB26Q9HCK0 441 aa11□□□□□ -0.65
VMP1-207ENST00000588131 WASH6PQ9NQA3 447 aa11□□□□□ -0.65
VMP1-207ENST00000588131 IMP3Q9NV31 184 aaKnown RBP11□□□□□ -0.65
VMP1-207ENST00000588131 STOX2Q9P2F5 926 aaPredicted RBP11□□□□□ -0.65
VMP1-207ENST00000588131 PILRBQ9UKJ0 227 aa11□□□□□ -0.65
VMP1-207ENST00000588131 PCOLCE2Q9UKZ9 415 aa11□□□□□ -0.65
VMP1-207ENST00000588131 TRBV23OR9-2A0A075B6M9 112 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 UBFD1O14562 309 aaKnown RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 CCNT2O60583 730 aaKnown RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 SLC16A8O95907 504 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 MTHFD1P11586 935 aaKnown RBP10.99□□□□□ -0.65
VMP1-207ENST00000588131 GGT5P36269 586 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 SERPINB5P36952 375 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 HALP42357 657 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 CTSKP43235 329 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 SLC6A12P48065 614 aa10.99□□□□□ -0.65
VMP1-207ENST00000588131 HNMTP50135 292 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms