RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 FOXR1Q6PIV2 292 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 TRMT10CQ7L0Y3 403 aaKnown RBP11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 RAB11FIP2Q7L804 512 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 B3GNT8Q7Z7M8 397 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 LSMEM2Q8N112 164 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 AGBL5Q8NDL9 886 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 GIMAP7Q8NHV1 300 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 LINGO1Q96FE5 620 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 NRSN2Q9GZP1 204 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 RAB33BQ9H082 229 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 SEMA6CQ9H3T2 930 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 ACSS3Q9H6R3 686 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 POPDC3Q9HBV1 291 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 SYTL2Q9HCH5 934 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 OR6C2Q9NZP2 312 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 LNPEPQ9UIQ6 1025 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 WASF3Q9UPY6 502 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 RUVBL2Q9Y230 463 aaKnown RBP11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 LOXL2Q9Y4K0 774 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 AK5Q9Y6K8 562 aa11.54□□□□□ -0.56
SDHDP1-201ENST00000588055 EXOC1LA0A1B0GW35 172 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 PIPSLA2A3N6 862 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 TLCD2A6NGC4 264 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 CXorf49A8MYA2 514 aaPredicted RBP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 PLD2O14939 933 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 ZBTB14O43829 449 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 PIAS1O75925 651 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 MATN4O95460 622 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 C1orf105O95561 183 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 SYF2O95926 243 aaKnown RBP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 C8GP07360 202 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 STMN1P16949 149 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 POLR2CP19387 275 aaPredicted RBP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 CDH3P22223 829 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 MPSTP25325 297 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 RBMS1P29558 406 aaKnown RBP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 PKLRP30613 574 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 GFERP55789 205 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 ZFP36L1Q07352 338 aaKnown RBP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 USP10Q14694 798 aaKnown RBP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 EFTUD2Q15029 972 aaKnown RBP eCLIP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 FAM92BQ6ZTR7 304 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 RAPH1Q70E73 1250 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 PIWIL4Q7Z3Z4 852 aaKnown RBP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 PRSS42Q7Z5A4 293 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 FAM129CQ86XR2 697 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 GSPT2Q8IYD1 628 aaKnown RBP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 CARFQ8N187 725 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 FBXO39Q8N4B4 442 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 NKAPQ8N5F7 415 aaKnown RBP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 RCBTB1Q8NDN9 531 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 SLC22A18Q96BI1 424 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 GPR22Q99680 433 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 SLC30A3Q99726 388 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 POLR1BQ9H9Y6 1135 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 GPAMQ9HCL2 828 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 SMYD2Q9NRG4 433 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 SOHLH2Q9NX45 425 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 OGFRQ9NZT2 677 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 TMEM9Q9P0T7 183 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 SPATA7Q9P0W8 599 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 GALPQ9UBC7 116 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 EPHA6Q9UF33 1036 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 PLAGL1Q9UM63 463 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 SATB2Q9UPW6 733 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 ICKQ9UPZ9 632 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 MED16Q9Y2X0 877 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 NFS1Q9Y697 457 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 UNC13CQ8NB66 2214 aa11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 COL27A1Q8IZC6 1860 aaPredicted RBP11.53□□□□□ -0.56
SDHDP1-201ENST00000588055 A8MU76 341 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 BTN3A1O00481 513 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 RASGRF2O14827 1237 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 CASC3O15234 703 aaKnown RBP11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 PSIP1O75475 530 aaKnown RBP11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 C9P02748 559 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 MPOP05164 745 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 ABHD2P08910 425 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 HIST1H2AGP0C0S8 130 aaPredicted RBP11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 ANKRD34CP0C6C1 535 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 HOXB3P14651 431 aaPredicted RBP11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 ZNF37AP17032 561 aaPredicted RBP11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 HIST1H2ADP20671 130 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 HSD17B2P37059 387 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 MLLT3P42568 568 aaPredicted RBP11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 TMEM164Q5U3C3 297 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 CACHD1Q5VU97 1274 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 ANKS6Q68DC2 871 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 PAQR3Q6TCH7 311 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 UNQ6494/PRO21346Q6UXR6 183 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 FRA10AC1Q70Z53 315 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 UBE2R2Q712K3 238 aaPredicted RBP11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 TMPRSS9Q7Z410 1059 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 MARCH9Q86YJ5 346 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 CNPY4Q8N129 248 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 MCOLN3Q8TDD5 553 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 EEF1AKMT1Q8WVE0 214 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 MRRFQ96E11 262 aaKnown RBP11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 HIST1H2AHQ96KK5 128 aa11.52□□□□□ -0.57
SDHDP1-201ENST00000588055 OLFM1Q99784 485 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms