RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 ZRANB2O95218 330 aaKnown RBP eCLIP8.28□□□□□ -1.08
SDF2-204ENST00000587338 SLC35G4P0C7Q5 338 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 CTAGE8P0CG41 777 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 PVRP15151 417 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 ST6GAL1P15907 406 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 SOX8P57073 446 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 OTUD4Q01804 1114 aaKnown RBP8.28□□□□□ -1.08
SDF2-204ENST00000587338 AIMP2Q13155 320 aaKnown RBP8.28□□□□□ -1.08
SDF2-204ENST00000587338 KRT33BQ14525 404 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 TLR1Q15399 786 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 TESK1Q15569 626 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 ATP13A4Q4VNC1 1196 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 FAM182AQ5T1J6 154 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 AGAP7PQ5VUJ5 663 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 IRAK1BP1Q5VVH5 260 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 ZNF385CQ66K41 422 aaPredicted RBP8.28□□□□□ -1.08
SDF2-204ENST00000587338 B3GNTL1Q67FW5 361 aaPredicted RBP8.28□□□□□ -1.08
SDF2-204ENST00000587338 AADACL2Q6P093 401 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 TMEM220Q6QAJ8 160 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 MRGPRGQ86SM5 289 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 CTAGE6Q86UF2 777 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 CTAGE4Q8IX94 777 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 GPR135Q8IZ08 494 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 BCORP1Q8N888 145 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 KCTD6Q8NC69 237 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 CCNYQ8ND76 341 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 BRSK1Q8TDC3 778 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 ALG3Q92685 438 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 FATE1Q969F0 183 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 RELTQ969Z4 430 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 MAGEB10Q96LZ2 347 aaPredicted RBP8.28□□□□□ -1.08
SDF2-204ENST00000587338 AGAP4Q96P64 663 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 TSGA13Q96PP4 275 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 TRIB3Q96RU7 358 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 CEP41Q9BYV8 373 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 EPS8L2Q9H6S3 715 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 MAGEE1Q9HCI5 957 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 IFT80Q9P2H3 777 aaPredicted RBP8.28□□□□□ -1.08
SDF2-204ENST00000587338 RNF14Q9UBS8 474 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 CDYLQ9Y232 598 aa8.28□□□□□ -1.08
SDF2-204ENST00000587338 CCDC78A2IDD5 438 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 LRRD1A4D1F6 860 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 AGPSO00116 658 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 PGRMC1O00264 195 aaKnown RBP8.27□□□□□ -1.09
SDF2-204ENST00000587338 MATN2O00339 956 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 BTN3A1O00481 513 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 CCL21O00585 134 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 CES2O00748 559 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 AURKAO14965 403 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 CNOT3O75175 753 aaKnown RBP8.27□□□□□ -1.09
SDF2-204ENST00000587338 OR2B3O76000 313 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 MT-CYBP00156 380 aaPredicted RBP8.27□□□□□ -1.09
SDF2-204ENST00000587338 FGGP02679 453 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 UMODP07911 640 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 MSL3P1P0C860 447 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 PYGMP11217 842 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 MX2P20592 715 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 SSTR2P30874 369 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 AKT1P31749 480 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 SLC25A11Q02978 314 aaKnown RBP8.27□□□□□ -1.09
SDF2-204ENST00000587338 GBE1Q04446 702 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 C2orf54Q08AI8 447 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 ZBTB17Q13105 803 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 PAFAH1B3Q15102 231 aaKnown RBP8.27□□□□□ -1.09
SDF2-204ENST00000587338 PPP2R5EQ16537 467 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 ZNF630Q2M218 657 aaPredicted RBP8.27□□□□□ -1.09
SDF2-204ENST00000587338 DEFB110Q30KQ9 67 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 FNBP1LQ5T0N5 605 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 LRRC38Q5VT99 294 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 PRAMEF13Q5VWM6 474 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 METRNLQ641Q3 311 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 KAZNQ674X7 775 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 FCRL6Q6DN72 434 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 FAM151BQ6UXP7 276 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 SPNS3Q6ZMD2 512 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 CDHR3Q6ZTQ4 885 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 DET1Q7L5Y6 550 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 CDH24Q86UP0 819 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 CREG2Q8IUH2 290 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 TMEM151BQ8IW70 566 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 KATNAL2Q8IYT4 538 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 RCOR2Q8IZ40 523 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 ZNF295-AS1Q8N0V1 137 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 ZNF808Q8N4W9 903 aaPredicted RBP8.27□□□□□ -1.09
SDF2-204ENST00000587338 BEND7Q8N7W2 519 aaPredicted RBP8.27□□□□□ -1.09
SDF2-204ENST00000587338 NAT14Q8WUY8 206 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 ZFPM2Q8WW38 1151 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 LCN9Q8WX39 176 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 PTERQ96BW5 349 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 CCDC120Q96HB5 630 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 RBM41Q96IZ5 413 aaKnown RBP8.27□□□□□ -1.09
SDF2-204ENST00000587338 AP1M1Q9BXS5 423 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 MAK16Q9BXY0 300 aaKnown RBP8.27□□□□□ -1.09
SDF2-204ENST00000587338 SRMSQ9H3Y6 488 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 L2HGDHQ9H9P8 463 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 SLC6A20Q9NP91 592 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 SH3BGRL2Q9UJC5 107 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 SPO11Q9Y5K1 396 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 COLEC10Q9Y6Z7 277 aa8.27□□□□□ -1.09
SDF2-204ENST00000587338 CCDC88CQ9P219 2028 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms