RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 H2AFJQ9BTM1 129 aa13.26□□□□□ -0.29
VMP1-203ENST00000586245 VIPAS39Q9H9C1 493 aa13.26□□□□□ -0.29
VMP1-203ENST00000586245 UCK1Q9HA47 277 aa13.26□□□□□ -0.29
VMP1-203ENST00000586245 PARVBQ9HBI1 364 aa13.26□□□□□ -0.29
VMP1-203ENST00000586245 U3KQA8 63 aa13.26□□□□□ -0.29
VMP1-203ENST00000586245 ARHGEF17Q96PE2 2063 aaPredicted RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 NPEPPSL1A6NEC2 478 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 LILRA5A6NI73 299 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 ARHGEF33A8MVX0 844 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 GOLGA8RI6L899 631 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 SLC30A4O14863 429 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 SYF2O95926 243 aaKnown RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 ENO2P09104 434 aaPredicted RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 PYGBP11216 843 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 CD1DP15813 335 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 TFEBP19484 476 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 SDHBP21912 280 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 ACP1P24666 158 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 GPR3P46089 330 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 PPM1FP49593 454 aaPredicted RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 DLG1Q12959 904 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 TSNQ15631 228 aaKnown RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 FRA10AC1Q70Z53 315 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 ALYREFQ86V81 257 aaKnown RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 LCA5Q86VQ0 697 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 CENPLQ8N0S6 344 aaPredicted RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 FBXO15Q8NCQ5 510 aaPredicted RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 DEFB124Q8NES8 71 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 OR52E1Q8NGJ3 308 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 IFI44Q8TCB0 444 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 LCN9Q8WX39 176 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 SCYL1Q96KG9 808 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 SLC12A9Q9BXP2 914 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 UNKQ9C0B0 810 aaKnown RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 STMN4Q9H169 189 aaPredicted RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 ACBD3Q9H3P7 528 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 IGSF5Q9NSI5 407 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 KCNK4Q9NYG8 393 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 ADAMTS6Q9UKP5 1117 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 NOVA2Q9UNW9 492 aaKnown RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 FAM186AA6NE01 2351 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 WDR87Q6ZQQ6 2873 aa13.25□□□□□ -0.29
VMP1-203ENST00000586245 COL5A1P20908 1838 aaPredicted RBP13.25□□□□□ -0.29
VMP1-203ENST00000586245 CCDC189A1A4V9 331 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 CDC7O00311 574 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 GSTA1P08263 222 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 KRT4P19013 534 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 CSRP1P21291 193 aaKnown RBP13.24□□□□□ -0.29
VMP1-203ENST00000586245 KCNA4P22459 653 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 ALDH4A1P30038 563 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 GMPRP36959 345 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 EPHA4P54764 986 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 NR1D2Q14995 579 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 ACAP2Q15057 778 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 TRIP6Q15654 476 aaKnown RBP13.24□□□□□ -0.29
VMP1-203ENST00000586245 ZNF438Q7Z4V0 828 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 TRABD2AQ86V40 505 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 ZNF761Q86XN6 746 aaPredicted RBP13.24□□□□□ -0.29
VMP1-203ENST00000586245 RASGRP3Q8IV61 690 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 SRRM1Q8IYB3 904 aaKnown RBP13.24□□□□□ -0.29
VMP1-203ENST00000586245 GOLGA6L1Q8N7Z2 621 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 Q8N9G6 341 aaPredicted RBP13.24□□□□□ -0.29
VMP1-203ENST00000586245 OR9A1PQ8NGU1 263 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 STAG3L4Q8TBR4 150 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 KIAA1191Q96A73 305 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 ZBTB9Q96C00 473 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 PGM2Q96G03 612 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 AHCYL2Q96HN2 611 aaKnown RBP13.24□□□□□ -0.29
VMP1-203ENST00000586245 SMC6Q96SB8 1091 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 CCDC3Q9BQI4 270 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 RAB11FIP5Q9BXF6 653 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 TFB2MQ9H5Q4 396 aaKnown RBP13.24□□□□□ -0.29
VMP1-203ENST00000586245 ALG9Q9H6U8 611 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 SENP1Q9P0U3 644 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 SPATA7Q9P0W8 599 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 DCDC2Q9UHG0 476 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 LNPEPQ9UIQ6 1025 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 RNF112Q9ULX5 631 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 PLAGL1Q9UM63 463 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 PDE10AQ9Y233 779 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 OARD1Q9Y530 152 aa13.24□□□□□ -0.29
VMP1-203ENST00000586245 ASCC3Q8N3C0 2202 aaKnown RBP13.23□□□□□ -0.29
VMP1-203ENST00000586245 ARID1BQ8NFD5 2236 aaPredicted RBP13.23□□□□□ -0.29
VMP1-203ENST00000586245 FAM221BA6H8Z2 402 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 ZNF839A8K0R7 811 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 FOXO6A8MYZ6 492 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 COPEO14579 308 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 GLRA3O75311 464 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 GP1BAP07359 652 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 RBP1P09455 135 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 AMD1P17707 334 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 SHMT2P34897 504 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 GLRBP48167 497 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 CCT5P48643 541 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 AP1S2P56377 157 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 OR1D5P58170 312 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 GPLD1P80108 840 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.23□□□□□ -0.29
VMP1-203ENST00000586245 PERM1Q5SV97 790 aa13.23□□□□□ -0.29
VMP1-203ENST00000586245 KLHL35Q6PF15 583 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms