RNA–Protein interactions for RNA: ENST00000585920.1

DNMT1-205, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-205ENST00000585920 LCN9Q8WX39 176 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 CAVIN3Q969G5 261 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 PAFAH2Q99487 392 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 HGH1Q9BTY7 390 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 SLC6A16Q9GZN6 736 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 EPB41L4BQ9H329 900 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 CAB39LQ9H9S4 337 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 POPDC3Q9HBV1 291 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 GPAMQ9HCL2 828 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 SLC24A2Q9UI40 661 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 NFS1Q9Y697 457 aa12.74□□□□□ -0.37
DNMT1-205ENST00000585920 LAMA1P25391 3075 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 ARID1BQ8NFD5 2236 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-205ENST00000585920 WDR87Q6ZQQ6 2873 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 IGHV1OR21-1A0A087WYE8 117 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 ZBTB14O43829 449 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 KRT38O76015 456 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 UBXN7O94888 489 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 DKK1O94907 266 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 MATN4O95460 622 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 TYRP1P17643 537 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 MAP4P27816 1152 aaKnown RBP12.73□□□□□ -0.37
DNMT1-205ENST00000585920 CD1CP29017 333 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 CRABP2P29373 138 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 HSD17B3P37058 310 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 CCNFP41002 786 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 RAB10P61026 200 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 INSM1Q01101 510 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-205ENST00000585920 SPIDRQ14159 915 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 NKAIN2Q5VXU1 208 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 RAPH1Q70E73 1250 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 PIWIL4Q7Z3Z4 852 aaKnown RBP12.73□□□□□ -0.37
DNMT1-205ENST00000585920 OR4E2Q8NGC2 313 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 OR52E1Q8NGJ3 308 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 JPH3Q8WXH2 748 aaPredicted RBP12.73□□□□□ -0.37
DNMT1-205ENST00000585920 ADAMTS14Q8WXS8 1223 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 NCSTNQ92542 709 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 RAD51AP1Q96B01 352 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 LINGO1Q96FE5 620 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 GFM1Q96RP9 751 aaKnown RBP12.73□□□□□ -0.37
DNMT1-205ENST00000585920 EPB41L1Q9H4G0 881 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 TFB2MQ9H5Q4 396 aaKnown RBP12.73□□□□□ -0.37
DNMT1-205ENST00000585920 ZNF180Q9UJW8 692 aa12.73□□□□□ -0.37
DNMT1-205ENST00000585920 RUVBL2Q9Y230 463 aaKnown RBP12.73□□□□□ -0.37
DNMT1-205ENST00000585920 A0A1W2PQM1 296 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 PHGDHO43175 533 aaKnown RBP12.72□□□□□ -0.37
DNMT1-205ENST00000585920 DUX1O43812 170 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 PSIP1O75475 530 aaKnown RBP12.72□□□□□ -0.37
DNMT1-205ENST00000585920 ERLIN1O75477 346 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 KRT37O76014 449 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 C1orf105O95561 183 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 CPNE6O95741 557 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 MT-CO3P00414 261 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 CATP04040 527 aaKnown RBP12.72□□□□□ -0.37
DNMT1-205ENST00000585920 PROS1P07225 676 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 CNTFP26441 200 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 SQSTM1Q13501 440 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 BMPR2Q13873 1038 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 ZNF460Q14592 562 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 CLPPQ16740 277 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-205ENST00000585920 N4BP2L1Q5TBK1 243 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-205ENST00000585920 ARMC6Q6NXE6 501 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 TMEM207Q6UWW9 146 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 DCUN1D3Q8IWE4 304 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 RAB42Q8N4Z0 105 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 DCAKDQ8WVC6 231 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 ASB11Q8WXH4 323 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 PDLIM5Q96HC4 596 aaKnown RBP12.72□□□□□ -0.37
DNMT1-205ENST00000585920 DPYSL5Q9BPU6 564 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 SRMSQ9H3Y6 488 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 FETUBQ9UGM5 382 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 TLK1Q9UKI8 766 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 ATXN7L1Q9ULK2 861 aaPredicted RBP12.72□□□□□ -0.37
DNMT1-205ENST00000585920 CEP250Q9BV73 2442 aa12.72□□□□□ -0.37
DNMT1-205ENST00000585920 HMX2A2RU54 273 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 OR6C74A6NCV1 312 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 GFYI3L273 518 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 NTN3O00634 580 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-205ENST00000585920 CASC3O15234 703 aaKnown RBP12.71□□□□□ -0.37
DNMT1-205ENST00000585920 SLC16A5O15375 505 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 TCEA3O75764 348 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 SHBGP04278 402 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 C8GP07360 202 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 SNRPAP09012 282 aaKnown RBP12.71□□□□□ -0.37
DNMT1-205ENST00000585920 JUPP14923 745 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 ZNF37AP17032 561 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-205ENST00000585920 TYK2P29597 1187 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 SHMT2P34897 504 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 BDKRB1P46663 353 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 IFFO1Q0D2I5 559 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 ZKSCAN8Q15776 578 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-205ENST00000585920 RBM44Q6ZP01 1051 aaKnown RBP12.71□□□□□ -0.37
DNMT1-205ENST00000585920 UBE2R2Q712K3 238 aaPredicted RBP12.71□□□□□ -0.37
DNMT1-205ENST00000585920 CMC1Q7Z7K0 106 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 AMIGO1Q86WK6 493 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 TMPRSS12Q86WS5 348 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 CNPY4Q8N129 248 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 CHCHD4Q8N4Q1 142 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 MCOLN3Q8TDD5 553 aa12.71□□□□□ -0.37
DNMT1-205ENST00000585920 DHRS4Q9BTZ2 278 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms