RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 PREPP48147 710 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 ADARP55265 1226 aaKnown RBP8.4□□□□□ -1.06
ATG4D-202ENST00000585437 ARL4CP56559 192 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 SARNPP82979 210 aaKnown RBP8.4□□□□□ -1.06
ATG4D-202ENST00000585437 PLOD1Q02809 727 aaPredicted RBP8.4□□□□□ -1.06
ATG4D-202ENST00000585437 ZSCAN26Q16670 478 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 TMEM164Q5U3C3 297 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 KLHL35Q6PF15 583 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 TMEM135Q86UB9 458 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 SLC22A15Q8IZD6 547 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 CARFQ8N187 725 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 ACVR1CQ8NER5 493 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 OR6P1Q8NGX9 317 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 LKAAEAR1Q8TD35 194 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 NAF1Q96HR8 494 aaKnown RBP8.4□□□□□ -1.06
ATG4D-202ENST00000585437 SLC41A2Q96JW4 573 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 FCRL3Q96P31 734 aaPredicted RBP8.4□□□□□ -1.06
ATG4D-202ENST00000585437 TGM7Q96PF1 710 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 TEFMQ96QE5 360 aaKnown RBP8.4□□□□□ -1.06
ATG4D-202ENST00000585437 CD180Q99467 661 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 TTC1Q99614 292 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 TRIM56Q9BRZ2 755 aaKnown RBP8.4□□□□□ -1.06
ATG4D-202ENST00000585437 ASPSCR1Q9BZE9 553 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 TFB2MQ9H5Q4 396 aaKnown RBP8.4□□□□□ -1.06
ATG4D-202ENST00000585437 MVB12BQ9H7P6 319 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 KLHL3Q9UH77 587 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 POMT2Q9UKY4 750 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 NOVA2Q9UNW9 492 aaKnown RBP8.4□□□□□ -1.06
ATG4D-202ENST00000585437 TMEM184BQ9Y519 407 aaPredicted RBP8.4□□□□□ -1.06
ATG4D-202ENST00000585437 B3GALT1Q9Y5Z6 326 aa8.4□□□□□ -1.06
ATG4D-202ENST00000585437 PCM1Q15154 2024 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 IGHV5-51A0A0C4DH38 117 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 ZCWPW2A0A1B0GU75 182 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 ERICH4A6NGS2 130 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 A8MU76 341 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 STMND1H3BQB6 276 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 K7ENP7 123 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 AGRPO00253 132 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 PRMT5O14744 637 aaPredicted RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 SPAG6O75602 509 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 VAPBO95292 243 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 ACSL3O95573 720 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 DLGAP3O95886 979 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 NELFEP18615 380 aaKnown RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 OGNP20774 298 aaKnown RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 AOAHP28039 575 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 CCR7P32248 378 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 PPARGP37231 505 aaPredicted RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 MAGEA4P43358 317 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 MAGOHP61326 146 aaKnown RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 GBX1Q14549 363 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 PLCL1Q15111 1095 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 TGIF1Q15583 401 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 HIF1AQ16665 826 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 DNAJC21Q5F1R6 531 aaKnown RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 SNAP47Q5SQN1 464 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 DCAF12Q5T6F0 453 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 RNF187Q5TA31 235 aaPredicted RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 BROXQ5VW32 411 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 ANKS6Q68DC2 871 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 INO80CQ6PI98 192 aaPredicted RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 CEACAM20Q6UY09 585 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 LDB1Q86U70 411 aaPredicted RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 OOSP2Q86WS3 158 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 LRRC6Q86X45 466 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 ZFAND4Q86XD8 727 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 FAM129CQ86XR2 697 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 KMT5CQ86Y97 462 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 CNPY4Q8N129 248 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 PDIK1LQ8N165 341 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 OR52E1Q8NGJ3 308 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 JPH3Q8WXH2 748 aaPredicted RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 ELMO1Q92556 727 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 LPGAT1Q92604 370 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 TFGQ92734 400 aaPredicted RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 ZBTB9Q96C00 473 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 ZDHHC12Q96GR4 267 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 SIGLEC10Q96LC7 697 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 BIRC8Q96P09 236 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 TCF12Q99081 682 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 ZPBPQ9BS86 351 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 PITPNM3Q9BZ71 974 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 APMAPQ9HDC9 416 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 SLC39A1Q9NY26 324 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 NINJ2Q9NZG7 142 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 FETUBQ9UGM5 382 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 PILRAQ9UKJ1 303 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 RALYQ9UKM9 306 aaKnown RBP8.39□□□□□ -1.07
ATG4D-202ENST00000585437 BTRCQ9Y297 605 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 COLEC10Q9Y6Z7 277 aa8.39□□□□□ -1.07
ATG4D-202ENST00000585437 TEX51A0A1B0GUA7 166 aa8.38□□□□□ -1.07
ATG4D-202ENST00000585437 TLDC2A0PJX2 215 aa8.38□□□□□ -1.07
ATG4D-202ENST00000585437 MAGEB16A2A368 324 aa8.38□□□□□ -1.07
ATG4D-202ENST00000585437 SDR42E2A6NKP2 422 aa8.38□□□□□ -1.07
ATG4D-202ENST00000585437 F8W8V4 182 aa8.38□□□□□ -1.07
ATG4D-202ENST00000585437 MATN2O00339 956 aa8.38□□□□□ -1.07
ATG4D-202ENST00000585437 IFRD1O00458 451 aaPredicted RBP8.38□□□□□ -1.07
ATG4D-202ENST00000585437 BTN3A1O00481 513 aa8.38□□□□□ -1.07
ATG4D-202ENST00000585437 EFSO43281 561 aa8.38□□□□□ -1.07
ATG4D-202ENST00000585437 USP1O94782 785 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms