RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 DNAJC22Q8N4W6 341 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 C19orf47Q8N9M1 422 aaKnown RBP13.97□□□□□ -0.17
SDF2-202ENST00000585428 CLEC1AQ8NC01 280 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 OR2Y1Q8NGV0 311 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 INPP5DQ92835 1189 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 VPS37BQ9H9H4 285 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 ZBTB20Q9HC78 741 aaPredicted RBP13.97□□□□□ -0.17
SDF2-202ENST00000585428 NLE1Q9NVX2 485 aaPredicted RBP13.97□□□□□ -0.17
SDF2-202ENST00000585428 P4HTMQ9NXG6 502 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 SPHK1Q9NYA1 384 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 FEZ2Q9UHY8 353 aaPredicted RBP13.97□□□□□ -0.17
SDF2-202ENST00000585428 SLC5A6Q9Y289 635 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.97□□□□□ -0.17
SDF2-202ENST00000585428 PCDHA3Q9Y5H8 950 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 ESPL1Q14674 2120 aa13.97□□□□□ -0.17
SDF2-202ENST00000585428 SPTAN1Q13813 2472 aaKnown RBP13.97□□□□□ -0.17
SDF2-202ENST00000585428 CRYBG3Q68DQ2 2970 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 MASP2O00187 686 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 KLHL41O60662 606 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 AP2A2O94973 939 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 UMODP07911 640 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 PRSS56P0CW18 603 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 RBP3P10745 1247 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 UGT2B7P16662 529 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 PSMA3P25788 255 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 OTUD4Q01804 1114 aaKnown RBP13.96□□□□□ -0.17
SDF2-202ENST00000585428 SPARCL1Q14515 664 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 ZRANB3Q5FWF4 1079 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 C1orf189Q5VU69 101 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 KCTD11Q693B1 232 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 C11orf63Q6NUN7 778 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 Q6ZS92 163 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 TMEM151BQ8IW70 566 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 TBC1D21Q8IYX1 336 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 OR5AR1Q8NGP9 310 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 CCDC110Q8TBZ0 833 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 PROKR1Q8TCW9 393 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 NACC2Q96BF6 587 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 CDKN2AIPNLQ96HQ2 116 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 DNAJC1Q96KC8 554 aaKnown RBP13.96□□□□□ -0.17
SDF2-202ENST00000585428 TBL1YQ9BQ87 522 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 FERMT1Q9BQL6 677 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 HGH1Q9BTY7 390 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 AP1M1Q9BXS5 423 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 SLC22A11Q9NSA0 550 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 OR6C2Q9NZP2 312 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 IFT80Q9P2H3 777 aaPredicted RBP13.96□□□□□ -0.17
SDF2-202ENST00000585428 POLG2Q9UHN1 485 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 TFR2Q9UP52 801 aa13.96□□□□□ -0.17
SDF2-202ENST00000585428 PTRH2Q9Y3E5 179 aaKnown RBP13.96□□□□□ -0.17
SDF2-202ENST00000585428 COPG1Q9Y678 874 aaKnown RBP13.96□□□□□ -0.17
SDF2-202ENST00000585428 ANKUB1A6NFN9 424 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 AKR1B15C9JRZ8 316 aaPredicted RBP13.95□□□□□ -0.18
SDF2-202ENST00000585428 BHMG1C9JSJ3 638 aaPredicted RBP13.95□□□□□ -0.18
SDF2-202ENST00000585428 PEX12O00623 359 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 LIN7AO14910 233 aaPredicted RBP13.95□□□□□ -0.18
SDF2-202ENST00000585428 KCNN4O15554 427 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 IPO13O94829 963 aaKnown RBP13.95□□□□□ -0.18
SDF2-202ENST00000585428 ONECUT2O95948 504 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 ALPPP05187 535 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 CHRM5P08912 532 aaPredicted RBP13.95□□□□□ -0.18
SDF2-202ENST00000585428 SPTBP11277 2137 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 SHMT2P34897 504 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 PTPN7P35236 360 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 FOLR3P41439 243 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 GCGRP47871 477 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 EIF3EP60228 445 aaKnown RBP13.95□□□□□ -0.18
SDF2-202ENST00000585428 KYNUQ16719 465 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 NKAIN1Q4KMZ8 207 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 LYPLAL1Q5VWZ2 237 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 TLDC1Q6P9B6 456 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 TAS2R42Q7RTR8 314 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 PPP1R32Q7Z5V6 425 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 CUZD1Q86UP6 607 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 TRIM73Q86UV7 250 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 CNGA4Q8IV77 575 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 ZADH2Q8N4Q0 377 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 N4BP2L2Q92802 583 aaPredicted RBP13.95□□□□□ -0.18
SDF2-202ENST00000585428 SPATA13Q96N96 652 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 PPP1R2P1Q96PQ5 205 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 ATP13A2Q9NQ11 1180 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 DHCR7Q9UBM7 475 aaKnown RBP13.95□□□□□ -0.18
SDF2-202ENST00000585428 GPN3Q9UHW5 284 aaPredicted RBP13.95□□□□□ -0.18
SDF2-202ENST00000585428 CDYLQ9Y232 598 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 NTNG1Q9Y2I2 539 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 PRSS21Q9Y6M0 314 aa13.95□□□□□ -0.18
SDF2-202ENST00000585428 ITPR2Q14571 2701 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 SPTBN1Q01082 2364 aaKnown RBP13.94□□□□□ -0.18
SDF2-202ENST00000585428 SLC5A10A0PJK1 596 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 MROH6A6NGR9 719 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 ENO4A6NNW6 628 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 AGPSO00116 658 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 ZSCAN9O15535 394 aaPredicted RBP13.94□□□□□ -0.18
SDF2-202ENST00000585428 TPH1P17752 444 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 CTNNA1P35221 906 aaKnown RBP13.94□□□□□ -0.18
SDF2-202ENST00000585428 FOXL2P58012 376 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 CACNG1Q06432 222 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 DBN1Q16643 649 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 PARP6Q2NL67 630 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 DEFB110Q30KQ9 67 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms