RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 GFAPP14136 432 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 SLC2A4P14672 509 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 IMPDH1P20839 514 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 BGNP21810 368 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 MAP4P27816 1152 aaKnown RBP15.71■□□□□ 0.11
SS18-226ENST00000585241 HNMTP50135 292 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 NAA20P61599 178 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 HERVK_113P63132 956 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 GRIK2Q13002 908 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 C1orf61Q13536 156 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 PCBP2Q15366 365 aaKnown RBP eCLIP15.71■□□□□ 0.11
SS18-226ENST00000585241 SHBQ15464 509 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 PFKFB4Q16877 469 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 CCSMST1Q4G0I0 132 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 TTC23LQ6PF05 361 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 IYDQ6PHW0 289 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 TAF8Q7Z7C8 310 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 GKN2Q86XP6 184 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 OR5AR1Q8NGP9 310 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 SREK1Q8WXA9 508 aaKnown RBP15.71■□□□□ 0.11
SS18-226ENST00000585241 RAD51AP1Q96B01 352 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 TMEM237Q96Q45 408 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 PKP4Q99569 1192 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 TMEM79Q9BSE2 394 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 GATA5Q9BWX5 397 aaPredicted RBP15.71■□□□□ 0.11
SS18-226ENST00000585241 ERVK-6Q9BXR3 956 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 TRIT1Q9H3H1 467 aaKnown RBP15.71■□□□□ 0.11
SS18-226ENST00000585241 ARL15Q9NXU5 204 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 SLC6A14Q9UN76 642 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 R4GN57 208 aa15.71■□□□□ 0.11
SS18-226ENST00000585241 ANKRD12Q6UB98 2062 aa15.71■□□□□ 0.1
SS18-226ENST00000585241 KIR2DS5A0A0G2JLQ3 304 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 A0A0G2JNG1 304 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 A0A1B0GTQ1 180 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 OR52A4PA6NMU1 304 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 KIR2DS3K7RE56 304 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 YKT6O15498 198 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 TAPBPO15533 448 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 DFNA5O60443 496 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 S100BP04271 92 aaPredicted RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 XRCC1P18887 633 aaPredicted RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 GRK2P25098 689 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 NDUFS1P28331 727 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 SERPINB5P36952 375 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 SLC6A12P48065 614 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 ARRB1P49407 418 aaPredicted RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 UBE2IP63279 158 aaKnown RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 TCF15Q12870 199 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 KIR2DS5Q14953 304 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 CHI3L2Q15782 390 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 ZXDCQ2QGD7 858 aaPredicted RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 ZNF678Q5SXM1 525 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 CES4AQ5XG92 561 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 DUS1LQ6P1R4 473 aaKnown RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 IL27RAQ6UWB1 636 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 KANSL1Q7Z3B3 1105 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 RAB44Q7Z6P3 723 aaPredicted RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 TAX1BP1Q86VP1 789 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 C17orf82Q86X59 251 aaPredicted RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 NAGSQ8N159 534 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 OR9A1PQ8NGU1 263 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 LMX1AQ8TE12 382 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 ATL1Q8WXF7 558 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 ZNF75CPQ92670 426 aaPredicted RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 PHF21BQ96EK2 531 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 MENTQ9BUN1 341 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 CAPS2Q9BXY5 557 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 KIR3DX1Q9H7L2 352 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 MANSC1Q9H8J5 431 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 IMP3Q9NV31 184 aaKnown RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 SPATA7Q9P0W8 599 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 ZNF624Q9P2J8 865 aaPredicted RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 POLG2Q9UHN1 485 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 ADAM21Q9UKJ8 722 aa15.7■□□□□ 0.1
SS18-226ENST00000585241 TNPO3Q9Y5L0 923 aaKnown RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 CFAP20Q9Y6A4 193 aaKnown RBP15.7■□□□□ 0.1
SS18-226ENST00000585241 TDRD6O60522 2096 aaKnown RBP15.69■□□□□ 0.1
SS18-226ENST00000585241 PABPN1LA6NDY0 278 aaKnown RBP15.69■□□□□ 0.1
SS18-226ENST00000585241 NCF1BA6NI72 391 aaPredicted RBP15.69■□□□□ 0.1
SS18-226ENST00000585241 NCF1CA8MVU1 366 aaPredicted RBP15.69■□□□□ 0.1
SS18-226ENST00000585241 TMEM114B3SHH9 223 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 YY2O15391 372 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 NPHS1O60500 1241 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 SHOX2O60902 331 aaPredicted RBP15.69■□□□□ 0.1
SS18-226ENST00000585241 SNNO75324 88 aaPredicted RBP15.69■□□□□ 0.1
SS18-226ENST00000585241 SLC34A2O95436 690 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 GUCA1CO95843 209 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 NCF1P14598 390 aaPredicted RBP15.69■□□□□ 0.1
SS18-226ENST00000585241 IMPA1P29218 277 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 EPHA8P29322 1005 aaPredicted RBP15.69■□□□□ 0.1
SS18-226ENST00000585241 MPLP40238 635 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 SLC19A1P41440 591 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 ARHGAP19Q14CB8 494 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 UNC50Q53HI1 259 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 PLA2G2CQ5R387 149 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 PRAMEF14Q5SWL7 426 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 ATG16L1Q676U5 607 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 LAIR1Q6GTX8 287 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 OGFOD3Q6PK18 319 aa15.69■□□□□ 0.1
SS18-226ENST00000585241 MBOAT1Q6ZNC8 495 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms