RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 STXBP4Q6ZWJ1 553 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 RSRC2Q7L4I2 434 aaKnown RBP2.61□□□□□ -1.99
VAPA-208ENST00000584796 MAATS1Q7Z4T9 603 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 GPR142Q7Z601 462 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 NAXEQ8NCW5 288 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 CSNK2A3Q8NEV1 391 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 FAM151AQ8WW52 585 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 TAAR8Q969N4 342 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 RHBDF1Q96CC6 855 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 ZNF689Q96CS4 500 aaPredicted RBP2.61□□□□□ -1.99
VAPA-208ENST00000584796 LINGO1Q96FE5 620 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 ART5Q96L15 291 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 OPRPNQ99935 248 aaPredicted RBP2.61□□□□□ -1.99
VAPA-208ENST00000584796 ANKRD2Q9GZV1 360 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 DNAJC18Q9H819 358 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 HYPKQ9NX55 129 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 PAK5Q9P286 719 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 PADI3Q9ULW8 664 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 ERVK-11Q9UQG0 969 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 RABGAP1Q9Y3P9 1069 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 C2CD2Q9Y426 696 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 PCDHGB3Q9Y5G1 929 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 MTCH2Q9Y6C9 303 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 SMG1Q96Q15 3661 aaKnown RBP2.61□□□□□ -1.99
VAPA-208ENST00000584796 SCN10AQ9Y5Y9 1956 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 ASH1LQ9NR48 2969 aaKnown RBP2.61□□□□□ -1.99
VAPA-208ENST00000584796 LOC400499M0QZD8 3231 aa2.61□□□□□ -1.99
VAPA-208ENST00000584796 IGSF10Q6WRI0 2623 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 HELZ2Q9BYK8 2649 aaKnown RBP2.6□□□□□ -1.99
VAPA-208ENST00000584796 MYH7P12883 1935 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 TENM4Q6N022 2769 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.6□□□□□ -1.99
VAPA-208ENST00000584796 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.6□□□□□ -1.99
VAPA-208ENST00000584796 DNM1LO00429 736 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 IRAK2O43187 625 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 AGR2O95994 175 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 CD48P09326 243 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 ZNF23P17027 643 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 COPB2P35606 906 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 AHRP35869 848 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 MAPK9P45984 424 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 VCPP55072 806 aaKnown RBP2.6□□□□□ -1.99
VAPA-208ENST00000584796 TAS2R38P59533 333 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 FOXM1Q08050 763 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 PPFIA1Q13136 1202 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 NAE1Q13564 534 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 PDE1CQ14123 709 aaPredicted RBP2.6□□□□□ -1.99
VAPA-208ENST00000584796 PPP2R5BQ15173 497 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 ZC2HC1CQ53FD0 456 aaPredicted RBP2.6□□□□□ -1.99
VAPA-208ENST00000584796 FBXO47Q5MNV8 452 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 LCE3EQ5T5B0 92 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 SPINK14Q6IE38 97 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 SUSD1Q6UWL2 747 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 RAD9BQ6WBX8 426 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 RBMS3Q6XE24 437 aaKnown RBP2.6□□□□□ -1.99
VAPA-208ENST00000584796 QSOX2Q6ZRP7 698 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 BBS12Q6ZW61 710 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 ASCL5Q7RTU5 278 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.6□□□□□ -1.99
VAPA-208ENST00000584796 NRROSQ86YC3 692 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 BEST3Q8N1M1 668 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 THAP6Q8TBB0 222 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 SLC38A5Q8WUX1 472 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 TEKT1Q969V4 418 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 ARHGEF26Q96DR7 871 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 GRAMD2BQ96HH9 432 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 CFAP53Q96M91 514 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 PPM1MQ96MI6 270 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 MPHOSPH8Q99549 860 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 HEMGNQ9BXL5 484 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 UBXN6Q9BZV1 441 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 WDR13Q9H1Z4 485 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 SLC7A10Q9NS82 523 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 HCN3Q9P1Z3 774 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 ACAD8Q9UKU7 415 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 TBX21Q9UL17 535 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 ACSL5Q9ULC5 683 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 NUDCQ9Y266 331 aa2.6□□□□□ -1.99
VAPA-208ENST00000584796 LRRFIP2Q9Y608 721 aaKnown RBP2.6□□□□□ -1.99
VAPA-208ENST00000584796 CNOT1A5YKK6 2376 aaKnown RBP2.6□□□□□ -1.99
VAPA-208ENST00000584796 A0A1B0GVC2 190 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 ANKRD18BA2A2Z9 1011 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 GAGE10A6NGK3 116 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 J3KRW8 73 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 IFNL4K9M1U5 179 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 CTAGE5O15320 804 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 EIF3DO15371 548 aaKnown RBP eCLIP2.59□□□□□ -1.99
VAPA-208ENST00000584796 SPINT2O43291 252 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 ARHGEF9O43307 516 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 FIBPO43427 364 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 CIDEAO60543 219 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 ZNF821O75541 412 aaPredicted RBP2.59□□□□□ -1.99
VAPA-208ENST00000584796 PDGFBP01127 241 aaPredicted RBP2.59□□□□□ -1.99
VAPA-208ENST00000584796 CA3P07451 260 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 CLTBP09497 229 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 IRF1P10914 325 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 TNFAIP3P21580 790 aa2.59□□□□□ -1.99
VAPA-208ENST00000584796 SP100P23497 879 aaPredicted RBP2.59□□□□□ -1.99
VAPA-208ENST00000584796 MCCP23508 829 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms