RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	ZNF410	Q86VK4	478 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	CATSPER3	Q86XQ3	398 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	SFTPA2	Q8IWL1	248 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	NEXN-AS1	Q8NBZ9	246 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	RSPH1	Q8WYR4	309 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	MMAB	Q96EY8	250 aa	Predicted RBP	3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	LXN	Q9BS40	222 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	SLC25A33	Q9BSK2	321 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	NFKBIZ	Q9BYH8	718 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	DHX33	Q9H6R0	707 aa	Known RBP	3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	C17orf75	Q9HAS0	396 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	FBRSL1	Q9HCM7	1045 aa	Known RBP	3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	NDRG3	Q9UGV2	375 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	A4GNT	Q9UNA3	340 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	TMEM5	Q9Y2B1	443 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	ZSWIM8	A7E2V4	1837 aa		3.16	□□□□□ -1.9
MSI2-215	ENST00000582453	SCN5A	Q14524	2016 aa		3.15	□□□□□ -1.9
MSI2-215	ENST00000582453	LCT	P09848	1927 aa		3.15	□□□□□ -1.9
MSI2-215	ENST00000582453	COL11A1	P12107	1806 aa	Predicted RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453		A0A1W2PQ09	198 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453		A0A1W2PRQ8	180 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	TYW5	A2RUC4	315 aa	Known RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	LINC01553	A4QN01	128 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	MYO1G	B0I1T2	1018 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	NPIPB11	E5RHQ5	1161 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	DDX39A	O00148	427 aa	Known RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	UBE2C	O00762	179 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CHMP2A	O43633	222 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	MED24	O75448	989 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	BEST1	O76090	585 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CSPG5	O95196	566 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	TIMP1	P01033	207 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CXCL10	P02778	98 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	HOXB5	P09067	269 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CLTB	P09497	229 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	ZNF286B	P0CG31	522 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	TFPI	P10646	304 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	SLC2A4	P14672	509 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	GABRB1	P18505	474 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CYP11B2	P19099	503 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	TMOD1	P28289	359 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CDA	P32320	146 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	RPL3	P39023	403 aa	Known RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CCT6A	P40227	531 aa	Known RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	GABRB2	P47870	512 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	ART1	P52961	327 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	HDAC4	P56524	1084 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CLDN2	P57739	230 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	MGAT3	Q09327	533 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	TRAF3	Q13114	568 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	MXD4	Q14582	209 aa	Predicted RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	PTGIS	Q16647	500 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	UGCG	Q16739	394 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	LRRC26	Q2I0M4	334 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	ASTE1	Q2TB18	679 aa	Predicted RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	DPCR1	Q3MIW9	517 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	ARMC3	Q5W041	872 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	FAM173B	Q6P4H8	233 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	TMCO3	Q6UWJ1	677 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CCDC73	Q6ZRK6	1079 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	C18orf65	Q6ZTR6	163 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CREB3L2	Q70SY1	520 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CHST9	Q7L1S5	443 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	LURAP1L	Q8IV03	231 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	SCML4	Q8N228	414 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	AADAT	Q8N5Z0	425 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	SYT2	Q8N9I0	419 aa	Predicted RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	TCP11	Q8WWU5	503 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	KIFAP3	Q92845	792 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	APBB2	Q92870	758 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	SNAPC3	Q92966	411 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CALML4	Q96GE6	196 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CCDC34	Q96HJ3	373 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	TXNDC15	Q96J42	360 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	C1orf74	Q96LT6	269 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	MMTAG2	Q9BU76	263 aa	Known RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	TNMD	Q9H2S6	317 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	C6orf106	Q9H6K1	298 aa	Predicted RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	SUCLA2	Q9P2R7	463 aa	Predicted RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	WRAP73	Q9P2S5	460 aa	Predicted RBP	3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	TUBE1	Q9UJT0	475 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	RPS6KA6	Q9UK32	745 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	ODF2L	Q9ULJ1	636 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	PAM16	Q9Y3D7	125 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	CLIC4	Q9Y696	253 aa		3.15	□□□□□ -1.91
MSI2-215	ENST00000582453	MGAM	O43451	1857 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	IGLV5-52	A0A0A0MRZ9	124 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453		A0A0U1RQF3	1178 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453		A0A0U1RQJ8	604 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	ARHGEF35	A5YM69	484 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	PRSS44	E7EML9	344 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453		H0YCG3	227 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	WNT9B	O14905	357 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	TIMM23	O14925	209 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	ADAM20	O43506	726 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	ATP2C2	O75185	946 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	VNN2	O95498	520 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	CH25H	O95992	272 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	TUBB	P07437	444 aa		3.14	□□□□□ -1.91
MSI2-215	ENST00000582453	GLUL	P15104	373 aa		3.14	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms