RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 KIR2DS5Q14953 304 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 C6orf132Q5T0Z8 1188 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 MBOAT1Q6ZNC8 495 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 DBX2Q6ZNG2 339 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 ASCL5Q7RTU5 278 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 ADAMTSL2Q86TH1 951 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 GPSM1Q86YR5 675 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 SLC35F3Q8IY50 421 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 TBC1D21Q8IYX1 336 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 ARL14Q8N4G2 192 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 EID2Q8N6I1 236 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 KYQ8NBH2 561 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 FBXO15Q8NCQ5 510 aaPredicted RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 GPR156Q8NFN8 814 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 OR4C6Q8NH72 309 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 OR5K2Q8NHB8 316 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 RHEBL1Q8TAI7 183 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 STAG3L4Q8TBR4 150 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 MCOLN3Q8TDD5 553 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 TCP10LQ8TDR4 215 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 DENND1AQ8TEH3 1009 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 CXorf40BQ96DE9 158 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 TSNARE1Q96NA8 513 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 CAMK1GQ96NX5 476 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 NRTNQ99748 197 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 MRPL57Q9BQC6 102 aaKnown RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 HGH1Q9BTY7 390 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 MRPL46Q9H2W6 279 aaKnown RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 TRIT1Q9H3H1 467 aaKnown RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 MVB12BQ9H7P6 319 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 SLC40A1Q9NP59 571 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 KCNK9Q9NPC2 374 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 MED4Q9NPJ6 270 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 UTP6Q9NYH9 597 aaKnown RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 CPSF2Q9P2I0 782 aaKnown RBP9.28□□□□□ -0.92
RFFL-210ENST00000582308 XPR1Q9UBH6 696 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 CIDEBQ9UHD4 219 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 RNF112Q9ULX5 631 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 BTBD3Q9Y2F9 522 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 OARD1Q9Y530 152 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 PCDHGB2Q9Y5G2 931 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 HEBP2Q9Y5Z4 205 aa9.28□□□□□ -0.92
RFFL-210ENST00000582308 GVINP1Q7Z2Y8 2422 aa9.27□□□□□ -0.92
RFFL-210ENST00000582308 COL5A1P20908 1838 aaPredicted RBP9.27□□□□□ -0.93
RFFL-210ENST00000582308 LY6G6EA0A0G2JKS1 128 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 TMEM120BA0PK00 339 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 G3V2L1 256 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 UBXN8O00124 270 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 MYO1CO00159 1063 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 PPM1DO15297 605 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 SIGLEC6O43699 453 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 ENO2P09104 434 aaPredicted RBP9.27□□□□□ -0.93
RFFL-210ENST00000582308 MYF5P13349 255 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 CYP2A7P20853 494 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 MAP4P27816 1152 aaKnown RBP9.27□□□□□ -0.93
RFFL-210ENST00000582308 NDUFS1P28331 727 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 HPDP32754 393 aaPredicted RBP9.27□□□□□ -0.93
RFFL-210ENST00000582308 ETV4P43268 484 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 RPIAP49247 311 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 KPNA2P52292 529 aaKnown RBP9.27□□□□□ -0.93
RFFL-210ENST00000582308 KRT33BQ14525 404 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 TGFBIQ15582 683 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 ZXDCQ2QGD7 858 aaPredicted RBP9.27□□□□□ -0.93
RFFL-210ENST00000582308 CCDC153Q494R4 210 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 C14orf28Q4W4Y0 310 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 HSP90B2PQ58FF3 399 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.27□□□□□ -0.93
RFFL-210ENST00000582308 ZCCHC8Q6NZY4 707 aaKnown RBP9.27□□□□□ -0.93
RFFL-210ENST00000582308 PRR23CQ6ZRP0 262 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 DCUN1D3Q8IWE4 304 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 TRIM48Q8IWZ4 208 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 ARMC2Q8NEN0 867 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 OR9A1PQ8NGU1 263 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 MAPK15Q8TD08 544 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 ZFPM2Q8WW38 1151 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 EXT2Q93063 718 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 FAM111AQ96PZ2 611 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 PKP4Q99569 1192 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 MENTQ9BUN1 341 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 EDEM2Q9BV94 578 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 DUSP23Q9BVJ7 150 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 TRIM54Q9BYV2 358 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 RDH14Q9HBH5 336 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 PLAGL1Q9UM63 463 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 TDRKHQ9Y2W6 561 aaKnown RBP9.27□□□□□ -0.93
RFFL-210ENST00000582308 COLEC10Q9Y6Z7 277 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 U3KQA8 63 aa9.27□□□□□ -0.93
RFFL-210ENST00000582308 NCF1BA6NI72 391 aaPredicted RBP9.26□□□□□ -0.93
RFFL-210ENST00000582308 SYCE1LA8MT33 242 aa9.26□□□□□ -0.93
RFFL-210ENST00000582308 NCF1CA8MVU1 366 aaPredicted RBP9.26□□□□□ -0.93
RFFL-210ENST00000582308 SUPT3HB4E1H0 165 aa9.26□□□□□ -0.93
RFFL-210ENST00000582308 TM9SF1O15321 606 aa9.26□□□□□ -0.93
RFFL-210ENST00000582308 KLK8O60259 260 aa9.26□□□□□ -0.93
RFFL-210ENST00000582308 GDF9O60383 454 aa9.26□□□□□ -0.93
RFFL-210ENST00000582308 DLX3O60479 287 aa9.26□□□□□ -0.93
RFFL-210ENST00000582308 SUPT3HO75486 399 aa9.26□□□□□ -0.93
RFFL-210ENST00000582308 ZWINTO95229 277 aa9.26□□□□□ -0.93
RFFL-210ENST00000582308 GUCA1CO95843 209 aa9.26□□□□□ -0.93
RFFL-210ENST00000582308 VIPP01282 170 aa9.26□□□□□ -0.93
RFFL-210ENST00000582308 RPN2P04844 631 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms