RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SLC6A19Q695T7 634 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 SPESP1Q6UW49 350 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 RAB43Q86YS6 212 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 PIANPQ8IYJ0 282 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 GPR135Q8IZ08 494 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 PRR7Q8TB68 274 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 SGSM3Q96HU1 749 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 DNAJC1Q96KC8 554 aaKnown RBP10.25□□□□□ -0.77
RFFL-209ENST00000581265 C17orf62Q9BQA9 187 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 KLHL25Q9H0H3 589 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 XKR8Q9H6D3 395 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 FAM60AQ9NP50 221 aa10.25□□□□□ -0.77
RFFL-209ENST00000581265 POLEQ07864 2286 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 PIKFYVEQ9Y2I7 2098 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 C2CD3Q4AC94 2353 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 MACROD2A1Z1Q3 448 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 WIPF3A6NGB9 483 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 OR2B3O76000 313 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 CLDN1O95832 211 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 IGHEP01854 428 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 PRSS56P0CW18 603 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 TPBGLP0DKB5 382 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 CBSLP0DN79 551 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 TPH1P17752 444 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 SHMT2P34897 504 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 CBSP35520 551 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 CYLC1P35663 651 aaPredicted RBP10.24□□□□□ -0.77
RFFL-209ENST00000581265 CETN2P41208 172 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 NSG1P42857 185 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 SOX8P57073 446 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 ZIC1Q15915 447 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 DBN1Q16643 649 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 PLEKHN1Q494U1 663 aaPredicted RBP10.24□□□□□ -0.77
RFFL-209ENST00000581265 PRR30Q53SZ7 412 aaPredicted RBP10.24□□□□□ -0.77
RFFL-209ENST00000581265 RHBDD2Q6NTF9 364 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 IGFL3Q6UXB1 125 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 UNC5AQ6ZN44 842 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 TAS2R42Q7RTR8 314 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 TMTC1Q8IUR5 882 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 TBC1D21Q8IYX1 336 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 RNF214Q8ND24 703 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 FLVCR1-AS1Q8TAF5 88 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 STYXQ8WUJ0 223 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 ALG3Q92685 438 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 FER1L6-AS2Q96M78 137 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 GBP5Q96PP8 586 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 OR2A14Q96R47 310 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 FAM118BQ9BPY3 351 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 HGH1Q9BTY7 390 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 MFRPQ9BY79 579 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 SLC29A3Q9BZD2 475 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 SPRTNQ9H040 489 aaPredicted RBP10.24□□□□□ -0.77
RFFL-209ENST00000581265 TSPY26PQ9H489 355 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 SMARCAL1Q9NZC9 954 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 OR6C2Q9NZP2 312 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 POLG2Q9UHN1 485 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 ICKQ9UPZ9 632 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 EPN1Q9Y6I3 576 aaPredicted RBP10.24□□□□□ -0.77
RFFL-209ENST00000581265 DUSP10Q9Y6W6 482 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 CNTRLQ7Z7A1 2325 aa10.24□□□□□ -0.77
RFFL-209ENST00000581265 RCCD1A6NED2 376 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 MROH6A6NGR9 719 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 BTNL10A8MVZ5 291 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 BHMG1C9JSJ3 638 aaPredicted RBP10.23□□□□□ -0.77
RFFL-209ENST00000581265 QSOX1O00391 747 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 HCRTR1O43613 425 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 KLHL41O60662 606 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 CBX6O95503 412 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 CHRM5P08912 532 aaPredicted RBP10.23□□□□□ -0.77
RFFL-209ENST00000581265 UGT2B7P16662 529 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 GRNP28799 593 aaKnown RBP10.23□□□□□ -0.77
RFFL-209ENST00000581265 OTX2P32243 289 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 DCDP81605 110 aaKnown RBP10.23□□□□□ -0.77
RFFL-209ENST00000581265 PLOD1Q02809 727 aaPredicted RBP10.23□□□□□ -0.77
RFFL-209ENST00000581265 MRPL49Q13405 166 aaKnown RBP10.23□□□□□ -0.77
RFFL-209ENST00000581265 ITIH4Q14624 930 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 MYBPC3Q14896 1274 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 DCAF10Q5QP82 559 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 VWA5B1Q5TIE3 1220 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 MLIPQ5VWP3 458 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 ARHGEF18Q6ZSZ5 1173 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 MICALCLQ6ZW33 695 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 MRGPREQ86SM8 312 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 HOOK3Q86VS8 718 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 C19orf47Q8N9M1 422 aaKnown RBP10.23□□□□□ -0.77
RFFL-209ENST00000581265 TTC13Q8NBP0 860 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 OR5AR1Q8NGP9 310 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 OR2Y1Q8NGV0 311 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 PROKR1Q8TCW9 393 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 N4BP2L2Q92802 583 aaPredicted RBP10.23□□□□□ -0.77
RFFL-209ENST00000581265 NACC2Q96BF6 587 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 PTERQ96BW5 349 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 AP1M1Q9BXS5 423 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 LRRC40Q9H9A6 602 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 SPHK1Q9NYA1 384 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 LUZP4Q9P127 313 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 ASF1AQ9Y294 204 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 B3GNT3Q9Y2A9 372 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 PRSS21Q9Y6M0 314 aa10.23□□□□□ -0.77
RFFL-209ENST00000581265 CENPEQ02224 2701 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms