RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 TSR3Q9UJK0 312 aaKnown RBP7.58□□□□□ -1.2
SMG6-211ENST00000572369 PCDHGA8Q9Y5G5 932 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 FAM169AQ9Y6X4 670 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 ADGRG4Q8IZF6 3080 aa7.58□□□□□ -1.2
SMG6-211ENST00000572369 ABCA2Q9BZC7 2435 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 ZCWPW2A0A1B0GU75 182 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 SLC5A10A0PJK1 596 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 GSAPA4D1B5 854 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 PMS2P1A4D2B8 440 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 EFCAB7A8K855 629 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 NIPSNAP2O75323 286 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 ESR1P03372 595 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 RPN2P04844 631 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 ITGA2BP08514 1039 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 ERVK-10P10266 1014 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 CCL4P13236 92 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 PKMP14618 531 aaKnown RBP7.57□□□□□ -1.2
SMG6-211ENST00000572369 POLR2CP19387 275 aaPredicted RBP7.57□□□□□ -1.2
SMG6-211ENST00000572369 IVDP26440 423 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 ARNTP27540 789 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 CCR7P32248 378 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 MLLT3P42568 568 aaPredicted RBP7.57□□□□□ -1.2
SMG6-211ENST00000572369 ARCN1P48444 511 aaKnown RBP7.57□□□□□ -1.2
SMG6-211ENST00000572369 ERVPABLB-1P60509 514 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 FOXM1Q08050 763 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 ABRQ12979 859 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 C16orf72Q14CZ0 275 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 TYSND1Q2T9J0 566 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 MSS51Q4VC12 460 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 HSP90AA5PQ58FG0 334 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 DNTTIP2Q5QJE6 756 aaKnown RBP7.57□□□□□ -1.2
SMG6-211ENST00000572369 CCDC25Q86WR0 208 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 CILP2Q8IUL8 1156 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 DENND6AQ8IWF6 608 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 SPACA3Q8IXA5 215 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 PALM2Q8IXS6 379 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 TBC1D21Q8IYX1 336 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 ZBED8Q8IZ13 594 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 ZNF248Q8NDW4 579 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 FBXO36Q8NEA4 188 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 OR4E2Q8NGC2 313 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 OR52E1Q8NGJ3 308 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 OR5AR1Q8NGP9 310 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 KIF18AQ8NI77 898 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 LKAAEAR1Q8TD35 194 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 USP7Q93009 1102 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 ART4Q93070 314 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 FAM136AQ96C01 138 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 LRRC39Q96DD0 335 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 C9orf72Q96LT7 481 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 PWWP2AQ96N64 755 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 FOPNLQ96NB1 174 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 TAAR9Q96RI9 348 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 P2RY12Q9H244 342 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 LRRC4CQ9HCJ2 640 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 HRASLS2Q9NWW9 162 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 SLC39A1Q9NY26 324 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 OGFRQ9NZT2 677 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 WHRNQ9P202 907 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 POLG2Q9UHN1 485 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 FBXO5Q9UKT4 447 aa7.57□□□□□ -1.2
SMG6-211ENST00000572369 F8P00451 2351 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 MN1Q10571 1320 aaPredicted RBP7.56□□□□□ -1.2
SMG6-211ENST00000572369 BSNQ9UPA5 3926 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 CTAGE15A4D2H0 777 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 OR5K3A6NET4 321 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 BHMG1C9JSJ3 638 aaPredicted RBP7.56□□□□□ -1.2
SMG6-211ENST00000572369 MATN2O00339 956 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 MAP3K7O43318 606 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 PRAMEF10O60809 474 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 DXOO77932 396 aaKnown RBP7.56□□□□□ -1.2
SMG6-211ENST00000572369 S1PR4O95977 384 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 C9P02748 559 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 CTAGE8P0CG41 777 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 CDH3P22223 829 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 AOAHP28039 575 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 SLC5A2P31639 672 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 ETV5P41161 510 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 SLC1A2P43004 574 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 LEPRP48357 1165 aaKnown RBP7.56□□□□□ -1.2
SMG6-211ENST00000572369 CARSP49589 748 aaKnown RBP7.56□□□□□ -1.2
SMG6-211ENST00000572369 PLTPP55058 493 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 TMPRSS3P57727 454 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 CAV1Q03135 178 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 TUBB2AQ13885 445 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 TTLL9Q3SXZ7 439 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 ZNF789Q5FWF6 425 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 CTSL3PQ5NE16 218 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 PLEKHS1Q5SXH7 462 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 DCAF12Q5T6F0 453 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 ARHGAP40Q5TG30 622 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 BROXQ5VW32 411 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 CYB5D1Q6P9G0 228 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 CNSTQ6PJW8 725 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 UNC5AQ6ZN44 842 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 CAPN12Q6ZSI9 719 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 ARHGAP22Q7Z5H3 698 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 CTAGE6Q86UF2 777 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 AMIGO1Q86WK6 493 aa7.56□□□□□ -1.2
SMG6-211ENST00000572369 CTAGE4Q8IX94 777 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms