RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 ANKHD1Q8IWZ3 2542 aaKnown RBP15.56■□□□□ 0.08
CLK3-223ENST00000568488 KLHL33A6NCF5 533 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 IFRD1O00458 451 aaPredicted RBP15.56■□□□□ 0.08
CLK3-223ENST00000568488 RASAL1O95294 804 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 CRYABP02511 175 aaKnown RBP15.56■□□□□ 0.08
CLK3-223ENST00000568488 UQCRHP07919 91 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 PYGMP11217 842 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 PIM1P11309 404 aaPredicted RBP15.56■□□□□ 0.08
CLK3-223ENST00000568488 AGAP20933 346 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 GABRA4P48169 554 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 TNFSF10P50591 281 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 INAQ16352 499 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 C3AR1Q16581 482 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 MEX3BQ6ZN04 569 aaKnown RBP15.56■□□□□ 0.08
CLK3-223ENST00000568488 MAP7D3Q8IWC1 876 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 FAM20CQ8IXL6 584 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 OR11G2Q8NGC1 345 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 CCDC110Q8TBZ0 833 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 BLOC1S5Q8TDH9 187 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 SPOCK3Q9BQ16 436 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 HGH1Q9BTY7 390 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 TRABDQ9H4I3 376 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 ZNF160Q9HCG1 818 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 SEMA3GQ9NS98 782 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 PKP3Q9Y446 797 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 NUP210LQ5VU65 1888 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 FBN3Q75N90 2809 aa15.56■□□□□ 0.08
CLK3-223ENST00000568488 LRRC53A6NM62 1247 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 SLC19A2O60779 497 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 UGT2B7P16662 529 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 CDK11BP21127 795 aaKnown RBP15.55■□□□□ 0.08
CLK3-223ENST00000568488 PTPRCAPQ14761 206 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 PDK2Q15119 407 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 SLC5A12Q1EHB4 618 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 GLT6D1Q7Z4J2 308 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 DNAJB8Q8NHS0 232 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 HM13Q8TCT9 377 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.55■□□□□ 0.08
CLK3-223ENST00000568488 DLG3Q92796 817 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 FKBP10Q96AY3 582 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 TADA1Q96BN2 335 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 LINC00615Q96LM1 132 aaPredicted RBP15.55■□□□□ 0.08
CLK3-223ENST00000568488 SPSB2Q99619 263 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 TMUB1Q9BVT8 246 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 WDR54Q9H977 334 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 MRM3Q9HC36 420 aaKnown RBP15.55■□□□□ 0.08
CLK3-223ENST00000568488 GLOD4Q9HC38 313 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 ABI3Q9P2A4 366 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 LIMA1Q9UHB6 759 aaKnown RBP15.55■□□□□ 0.08
CLK3-223ENST00000568488 TINAGQ9UJW2 476 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 PLCL2Q9UPR0 1127 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 PCDHGB6Q9Y5F9 930 aa15.55■□□□□ 0.08
CLK3-223ENST00000568488 C17orf113A0A1B0GUU1 675 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 FANCGO15287 622 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 ALBP02768 609 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 DRD2P14416 443 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 TNNT3P45378 269 aaPredicted RBP15.54■□□□□ 0.08
CLK3-223ENST00000568488 CSNK1G2P78368 415 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 BCL7AQ4VC05 210 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 KBTBD2Q8IY47 623 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 ADAMTS18Q8TE60 1221 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 HAS2Q92819 552 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 DCUN1D1Q96GG9 259 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 MESP1Q9BRJ9 268 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 ISCUQ9H1K1 167 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 ASB8Q9H765 288 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 MVB12BQ9H7P6 319 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 MYO6Q9UM54 1294 aa15.54■□□□□ 0.08
CLK3-223ENST00000568488 A0A0J9YY10 115 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 MYO1FO00160 1098 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 GAPDHSO14556 408 aaPredicted RBP15.53■□□□□ 0.08
CLK3-223ENST00000568488 SGTAO43765 313 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 HPP00738 406 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 SKILP12757 684 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 ITGAXP20702 1163 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 CHRNA4P43681 627 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 ARSFP54793 590 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 KLHL30Q0D2K2 578 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 SLC14A2Q15849 920 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 SIRPB2Q5JXA9 342 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 CPNE8Q86YQ8 564 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 DNAJC22Q8N4W6 341 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 METTL27Q8N6F8 245 aaPredicted RBP15.53■□□□□ 0.08
CLK3-223ENST00000568488 SIRT6Q8N6T7 355 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 SUN3Q8TAQ9 357 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 BRIX1Q8TDN6 353 aaKnown RBP15.53■□□□□ 0.08
CLK3-223ENST00000568488 OR2A14Q96R47 310 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 THAP2Q9H0W7 228 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 GPAMQ9HCL2 828 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 SMOXQ9NWM0 555 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 SPHK1Q9NYA1 384 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 HACD3Q9P035 362 aa15.53■□□□□ 0.08
CLK3-223ENST00000568488 MRPS2Q9Y399 296 aaKnown RBP15.53■□□□□ 0.08
CLK3-223ENST00000568488 A0A0A6YYK5 440 aaPredicted RBP15.52■□□□□ 0.08
CLK3-223ENST00000568488 A0A1B0GX78 115 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 STX7O15400 261 aaKnown RBP15.52■□□□□ 0.08
CLK3-223ENST00000568488 WISP2O76076 250 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 USP1O94782 785 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 PRAMEF1O95521 474 aa15.52■□□□□ 0.08
CLK3-223ENST00000568488 RALBP11234 206 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms