RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 KIAA0754O94854 1291 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 FMO4P31512 558 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 HSD11B2P80365 405 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 PRKAA1Q13131 559 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 TUBB3Q13509 450 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 THOC5Q13769 683 aaKnown RBP24.4■■□□□ 1.5
FANCA-228ENST00000567943 TMED2Q15363 201 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 TBR1Q16650 682 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 CTSL3PQ5NE16 218 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 PWWP2BQ6NUJ5 590 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 SYT10Q6XYQ8 523 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 PPP1R3BQ86XI6 285 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 RASGRP3Q8IV61 690 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 SLC22A15Q8IZD6 547 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 ADGRF3Q8IZF5 1079 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 SLC45A3Q96JT2 553 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 KRT12Q99456 494 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 TRIT1Q9H3H1 467 aaKnown RBP24.4■■□□□ 1.5
FANCA-228ENST00000567943 GPN2Q9H9Y4 310 aaPredicted RBP24.4■■□□□ 1.5
FANCA-228ENST00000567943 ICKQ9UPZ9 632 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 CRYL1Q9Y2S2 319 aa24.4■■□□□ 1.5
FANCA-228ENST00000567943 TLN1Q9Y490 2541 aaKnown RBP24.39■■□□□ 1.5
FANCA-228ENST00000567943 HELZ2Q9BYK8 2649 aaKnown RBP24.39■■□□□ 1.5
FANCA-228ENST00000567943 TERTO14746 1132 aaKnown RBP24.39■■□□□ 1.49
FANCA-228ENST00000567943 ZBTB11O95625 1053 aaPredicted RBP24.39■■□□□ 1.49
FANCA-228ENST00000567943 PRDX3P30048 256 aaKnown RBP24.39■■□□□ 1.49
FANCA-228ENST00000567943 DHX9Q08211 1270 aaKnown RBP24.39■■□□□ 1.49
FANCA-228ENST00000567943 ZNF470Q6ECI4 717 aa24.39■■□□□ 1.49
FANCA-228ENST00000567943 CENPUQ71F23 418 aa24.39■■□□□ 1.49
FANCA-228ENST00000567943 AMIGO1Q86WK6 493 aa24.39■■□□□ 1.49
FANCA-228ENST00000567943 CILP2Q8IUL8 1156 aa24.39■■□□□ 1.49
FANCA-228ENST00000567943 TBC1D21Q8IYX1 336 aa24.39■■□□□ 1.49
FANCA-228ENST00000567943 ESX1Q8N693 406 aa24.39■■□□□ 1.49
FANCA-228ENST00000567943 BIRC8Q96P09 236 aa24.39■■□□□ 1.49
FANCA-228ENST00000567943 FGF21Q9NSA1 209 aa24.39■■□□□ 1.49
FANCA-228ENST00000567943 C20orf96Q9NUD7 363 aaPredicted RBP24.39■■□□□ 1.49
FANCA-228ENST00000567943 BTRCQ9Y297 605 aa24.39■■□□□ 1.49
FANCA-228ENST00000567943 TDRKHQ9Y2W6 561 aaKnown RBP24.39■■□□□ 1.49
FANCA-228ENST00000567943 GSAPA4D1B5 854 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 SLC9B1P1A6NJY1 282 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 NKX2-8O15522 239 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 BANF1O75531 89 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 LONRF1Q17RB8 773 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 DNAJC21Q5F1R6 531 aaKnown RBP24.38■■□□□ 1.49
FANCA-228ENST00000567943 C6orf15Q6UXA7 325 aaPredicted RBP24.38■■□□□ 1.49
FANCA-228ENST00000567943 CARFQ8N187 725 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 OR5K2Q8NHB8 316 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 PITPNM3Q9BZ71 974 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 TRIM31Q9BZY9 425 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 TWSG1Q9GZX9 223 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 C1GALT1Q9NS00 363 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 POLG2Q9UHN1 485 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 LNPEPQ9UIQ6 1025 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 RARRES3Q9UL19 164 aa24.38■■□□□ 1.49
FANCA-228ENST00000567943 NIPSNAP2O75323 286 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 ESR1P03372 595 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 F7P08709 466 aaPredicted RBP24.37■■□□□ 1.49
FANCA-228ENST00000567943 PGAM1P18669 254 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 ARL4DP49703 201 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 ABRQ12979 859 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 MORF4L2Q15014 288 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 GPR19Q15760 415 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 BBS9Q3SYG4 887 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 MSS51Q4VC12 460 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 ZNF789Q5FWF6 425 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 OTOAQ7RTW8 1153 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 DENND6AQ8IWF6 608 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 SERBP1Q8NC51 408 aaKnown RBP eCLIP24.37■■□□□ 1.49
FANCA-228ENST00000567943 CFAP61Q8NHU2 1237 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 ZNF501Q96CX3 271 aaPredicted RBP24.37■■□□□ 1.49
FANCA-228ENST00000567943 MED8Q96G25 268 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 AKIRIN1Q9H9L7 192 aaPredicted RBP24.37■■□□□ 1.49
FANCA-228ENST00000567943 PDE7BQ9NP56 450 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 INTS10Q9NVR2 710 aaKnown RBP24.37■■□□□ 1.49
FANCA-228ENST00000567943 VPS9D1Q9Y2B5 631 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 MRPS18BQ9Y676 258 aaKnown RBP24.37■■□□□ 1.49
FANCA-228ENST00000567943 FAM169AQ9Y6X4 670 aa24.37■■□□□ 1.49
FANCA-228ENST00000567943 H3BMM5 538 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 MATN2O00339 956 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 KPNA5O15131 536 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 SLCO2B1O94956 709 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 S1PR4O95977 384 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 ST6GAL1P15907 406 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 ADARP55265 1226 aaKnown RBP24.36■■□□□ 1.49
FANCA-228ENST00000567943 TUBB4BP68371 445 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 MRPS25P82663 173 aaKnown RBP24.36■■□□□ 1.49
FANCA-228ENST00000567943 ACY1Q03154 408 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 C19orf57Q0VDD7 668 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 CTBP1Q13363 440 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 TUBB2AQ13885 445 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 UNC5AQ6ZN44 842 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 FLVCR1-AS1Q8TAF5 88 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 GSDMBQ8TAX9 411 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 FAM136AQ96C01 138 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 PWWP2AQ96N64 755 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 EBNA1BP2Q99848 306 aaKnown RBP24.36■■□□□ 1.49
FANCA-228ENST00000567943 TUBB2BQ9BVA1 445 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 FBXO6Q9NRD1 293 aaPredicted RBP24.36■■□□□ 1.49
FANCA-228ENST00000567943 PLAGL1Q9UM63 463 aa24.36■■□□□ 1.49
FANCA-228ENST00000567943 EFCAB8A8MWE9 144 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms