RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 OR52E1Q8NGJ3 308 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 GABPB2Q8TAK5 448 aaPredicted RBP13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 GSDMBQ8TAX9 411 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 PYROXD1Q8WU10 500 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 KLHL6Q8WZ60 621 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 UBXN4Q92575 508 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 TEFMQ96QE5 360 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 CD180Q99467 661 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 ZPBPQ9BS86 351 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 TRIT1Q9H3H1 467 aaKnown RBP13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 SRMSQ9H3Y6 488 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 LATS2Q9NRM7 1088 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 FAM114A2Q9NRY5 505 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 MOCS1Q9NZB8 636 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 FOXJ2Q9P0K8 574 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 SEMA5BQ9P283 1151 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 GALPQ9UBC7 116 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 POLG2Q9UHN1 485 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 B3GALT1Q9Y5Z6 326 aa13.44□□□□□ -0.26
HERPUD1-210ENST00000565966 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 MATN2O00339 956 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 SEC16AO15027 2179 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 POLR1CO15160 346 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 AHSGP02765 367 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 LIPCP11150 499 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 POLR2CP19387 275 aaPredicted RBP13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 CHRM3P20309 590 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 UCNP55089 124 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 PPP1CAP62136 330 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 PRKG2Q13237 762 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 CLN3Q13286 438 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 GBX1Q14549 363 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 DNTTIP2Q5QJE6 756 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 ANKS6Q68DC2 871 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 CAPN12Q6ZSI9 719 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 OTOAQ7RTW8 1153 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 CCDC25Q86WR0 208 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 ZFAND4Q86XD8 727 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 PALM2Q8IXS6 379 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 OR5AR1Q8NGP9 310 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 OR5K2Q8NHB8 316 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 PMEPA1Q969W9 287 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 FAM136AQ96C01 138 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 MAP3K3Q99759 626 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 HGH1Q9BTY7 390 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 PPANQ9NQ55 473 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 SIDT1Q9NXL6 827 aaKnown RBP13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 SSUH2Q9Y2M2 353 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 MED16Q9Y2X0 877 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 PCDHB11Q9Y5F2 797 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 FAM208BQ5VWN6 2430 aa13.43□□□□□ -0.26
HERPUD1-210ENST00000565966 CFAP47Q6ZTR5 3102 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 IGHV5-51A0A0C4DH38 117 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 TLCD2A6NGC4 264 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 E5RI56 91 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 STMND1H3BQB6 276 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 ZNF500O60304 480 aaPredicted RBP13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 KDM1AO60341 852 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 NELFEP18615 380 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 SSTR1P30872 391 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 CLCN7P51798 805 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 GPX6P59796 221 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 FOXM1Q08050 763 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 MGAT5Q09328 741 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 CYB5D1Q6P9G0 228 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 GALNT7Q86SF2 657 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 AMIGO1Q86WK6 493 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 DTX1Q86Y01 620 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 KMT5CQ86Y97 462 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 SPNS2Q8IVW8 549 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 CARFQ8N187 725 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 KCNJ9Q92806 393 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 SLC41A2Q96JW4 573 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 SLC30A3Q99726 388 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 AARSD1Q9BTE6 412 aaKnown RBP13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 CCDC68Q9H2F9 335 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 L2HGDHQ9H9P8 463 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 APMAPQ9HDC9 416 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 LHX6Q9UPM6 363 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 COMMD10Q9Y6G5 202 aa13.42□□□□□ -0.26
HERPUD1-210ENST00000565966 GSAPA4D1B5 854 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 BTN3A3O00478 584 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 BTN3A1O00481 513 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 RPN2P04844 631 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 GSTA2P09210 222 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 TPBGLP0DKB5 382 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 SHMT2P34897 504 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 MAGEA4P43358 317 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 KPNA2P52292 529 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 TMPRSS3P57727 454 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 SH3BP2P78314 561 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 ABRQ12979 859 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 IL11RAQ14626 422 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 TGIF1Q15583 401 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 UNC5DQ6UXZ4 953 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 ZBTB2Q8N680 514 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 SIDT2Q8NBJ9 832 aaKnown RBP13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 LRRN4CLQ8ND94 238 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 GIMAP7Q8NHV1 300 aa13.41□□□□□ -0.26
HERPUD1-210ENST00000565966 NRTNQ99748 197 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms