RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 MATN4O95460 622 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 ACSL3O95573 720 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 JMJD7P0C870 316 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 THRAP10827 490 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 POLR2CP19387 275 aaPredicted RBP15.52■□□□□ 0.08
RAB40C-208ENST00000564703 ECHS1P30084 290 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 CSF2RBP32927 897 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 LSSP48449 732 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 ARL4DP49703 201 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 CDKN2DP55273 166 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 POU4F1Q01851 419 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 GBX1Q14549 363 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 CACHD1Q5VU97 1274 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 PAQR3Q6TCH7 311 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 FAM92BQ6ZTR7 304 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 CPNE9Q8IYJ1 553 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 MYO1HQ8N1T3 1032 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 AGBL5Q8NDL9 886 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 RCBTB1Q8NDN9 531 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 EEF1AKMT1Q8WVE0 214 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.52■□□□□ 0.08
RAB40C-208ENST00000564703 NXPE2Q96DL1 559 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 TSPAN17Q96FV3 270 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 SLC30A3Q99726 388 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 RAB11FIP5Q9BXF6 653 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 XKR8Q9H6D3 395 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 OR6C2Q9NZP2 312 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 TMEM9Q9P0T7 183 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 MED16Q9Y2X0 877 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 NFS1Q9Y697 457 aa15.52■□□□□ 0.08
RAB40C-208ENST00000564703 DCHS1Q96JQ0 3298 aa15.52■□□□□ 0.07
RAB40C-208ENST00000564703 PIPSLA2A3N6 862 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 C2orf74A8MZ97 194 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 PLD2O14939 933 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 C1orf105O95561 183 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 C9P02748 559 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 MPOP05164 745 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 PMS2P54278 862 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 GABREP78334 506 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 CAMK2BQ13554 666 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 USP10Q14694 798 aaKnown RBP15.51■□□□□ 0.07
RAB40C-208ENST00000564703 TRMT10CQ7L0Y3 403 aaKnown RBP15.51■□□□□ 0.07
RAB40C-208ENST00000564703 NKAPQ8N5F7 415 aaKnown RBP15.51■□□□□ 0.07
RAB40C-208ENST00000564703 MCOLN3Q8TDD5 553 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 MRRFQ96E11 262 aaKnown RBP15.51■□□□□ 0.07
RAB40C-208ENST00000564703 CD180Q99467 661 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 RBBP8Q99708 897 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 TRIM54Q9BYV2 358 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 SATB2Q9UPW6 733 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 MTO1Q9Y2Z2 717 aaKnown RBP15.51■□□□□ 0.07
RAB40C-208ENST00000564703 LOXL2Q9Y4K0 774 aa15.51■□□□□ 0.07
RAB40C-208ENST00000564703 MN1Q10571 1320 aaPredicted RBP15.5■□□□□ 0.07
RAB40C-208ENST00000564703 A0A087WUV0 522 aaPredicted RBP15.5■□□□□ 0.07
RAB40C-208ENST00000564703 ISM1B1AKI9 464 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 HIST1H2AGP0C0S8 130 aaPredicted RBP15.5■□□□□ 0.07
RAB40C-208ENST00000564703 HIST1H2ADP20671 130 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 FDXRP22570 491 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 RAB28P51157 221 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 PDX1P52945 283 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 GFERP55789 205 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 RTP5Q14D33 572 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 UAP1Q16222 522 aaPredicted RBP15.5■□□□□ 0.07
RAB40C-208ENST00000564703 TMEM164Q5U3C3 297 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 CYHR1Q6ZMK1 362 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 ARHGAP22Q7Z5H3 698 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 GIMAP7Q8NHV1 300 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 ASB11Q8WXH4 323 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 SLC22A18Q96BI1 424 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 HIST1H2AHQ96KK5 128 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 HIST1H2AJQ99878 128 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 H2AFJQ9BTM1 129 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 ACSS3Q9H6R3 686 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 PLAGL1Q9UM63 463 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 ICKQ9UPZ9 632 aa15.5■□□□□ 0.07
RAB40C-208ENST00000564703 RUVBL2Q9Y230 463 aaKnown RBP15.5■□□□□ 0.07
RAB40C-208ENST00000564703 ZNF839A8K0R7 811 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 BTN3A3O00478 584 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 BTN3A1O00481 513 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 PSIP1O75475 530 aaKnown RBP15.49■□□□□ 0.07
RAB40C-208ENST00000564703 TNFSF15O95150 251 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 SYF2O95926 243 aaKnown RBP15.49■□□□□ 0.07
RAB40C-208ENST00000564703 C8GP07360 202 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 STMN1P16949 149 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 CYP2A7P20853 494 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 CDH3P22223 829 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 PRDX3P30048 256 aaKnown RBP15.49■□□□□ 0.07
RAB40C-208ENST00000564703 HSD17B2P37059 387 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 BDKRB1P46663 353 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 SEPHS1P49903 392 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 TAS2R39P59534 338 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 TIAL1Q01085 375 aaKnown RBP eCLIP15.49■□□□□ 0.07
RAB40C-208ENST00000564703 CYP4F3Q08477 520 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 C16orf72Q14CZ0 275 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 UBE2R2Q712K3 238 aaPredicted RBP15.49■□□□□ 0.07
RAB40C-208ENST00000564703 FAM129CQ86XR2 697 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 ADGRF3Q8IZF5 1079 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 CARFQ8N187 725 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 OR9A1PQ8NGU1 263 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 LINGO1Q96FE5 620 aa15.49■□□□□ 0.07
RAB40C-208ENST00000564703 MAP3K3Q99759 626 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms