RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PPP1R3AQ16821 1122 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 PRRT3Q5FWE3 981 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 HHATQ5VTY9 493 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 SLC23A3Q6PIS1 610 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 SLC30A9Q6PML9 568 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 IL27RAQ6UWB1 636 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 FRA10AC1Q70Z53 315 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 TAF8Q7Z7C8 310 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 GPSM1Q86YR5 675 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 FBXO15Q8NCQ5 510 aaPredicted RBP12.59□□□□□ -0.39
SPG7-209ENST00000564047 SPDYE1Q8NFV5 336 aaPredicted RBP12.59□□□□□ -0.39
SPG7-209ENST00000564047 TFGQ92734 400 aaPredicted RBP12.59□□□□□ -0.39
SPG7-209ENST00000564047 RMDN2Q96LZ7 410 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 ELF4Q99607 663 aaPredicted RBP12.59□□□□□ -0.39
SPG7-209ENST00000564047 TRIM54Q9BYV2 358 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 PARVBQ9HBI1 364 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 CAPN10Q9HC96 672 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 PRDM8Q9NQV8 689 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 COPG2Q9UBF2 871 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 TBC1D29Q9UFV1 150 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 TMCO1Q9UM00 188 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 PSMD13Q9UNM6 376 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 WDR37Q9Y2I8 494 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 THADAQ6YHU6 1953 aa12.59□□□□□ -0.39
SPG7-209ENST00000564047 CEP192Q8TEP8 1941 aa12.58□□□□□ -0.39
SPG7-209ENST00000564047 SPAG17Q6Q759 2223 aa12.58□□□□□ -0.39
SPG7-209ENST00000564047 TNRC6BQ9UPQ9 1833 aaKnown RBP12.58□□□□□ -0.4
SPG7-209ENST00000564047 BIRC5O15392 142 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 GDF9O60383 454 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 DFNA5O60443 496 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 SNX2O60749 519 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 SMIM24O75264 130 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 PIAS2O75928 621 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 KIAA0754O94854 1291 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 C1orf105O95561 183 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 RPN2P04844 631 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 CFIP05156 583 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 BPGMP07738 259 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 HIST1H2AGP0C0S8 130 aaPredicted RBP12.58□□□□□ -0.4
SPG7-209ENST00000564047 TPBGLP0DKB5 382 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 MYL2P10916 166 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 F3P13726 295 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 MTHFD2P13995 350 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 HIST1H2ADP20671 130 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 MAP4P27816 1152 aaKnown RBP12.58□□□□□ -0.4
SPG7-209ENST00000564047 MPLP40238 635 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 SERPINB4P48594 390 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 RPIAP49247 311 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 ARRB1P49407 418 aaPredicted RBP12.58□□□□□ -0.4
SPG7-209ENST00000564047 CDKL1Q00532 357 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 GRIK2Q13002 908 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 C1orf61Q13536 156 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 CLCA4Q14CN2 919 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 TGFBIQ15582 683 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 PHKG1Q16816 387 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 ZNF423Q2M1K9 1284 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 CDKL4Q5MAI5 379 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 PRAMEF14Q5SWL7 426 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 C6orf89Q6UWU4 347 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 ZYG11AQ6WRX3 759 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 GKN2Q86XP6 184 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 ZNF548Q8NEK5 533 aaPredicted RBP12.58□□□□□ -0.4
SPG7-209ENST00000564047 CFAP61Q8NHU2 1237 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 MAGEC3Q8TD91 643 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 MGARPQ8TDB4 240 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 MCOLN3Q8TDD5 553 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 LMX1AQ8TE12 382 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 DLG3Q92796 817 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 CCDC126Q96EE4 140 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 HIST1H2AHQ96KK5 128 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 C12orf66Q96MD2 445 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 ZNF317Q96PQ6 595 aaPredicted RBP12.58□□□□□ -0.4
SPG7-209ENST00000564047 INSM2Q96T92 566 aaPredicted RBP12.58□□□□□ -0.4
SPG7-209ENST00000564047 HIST1H2AJQ99878 128 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 H2AFJQ9BTM1 129 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 NSRP1Q9H0G5 558 aaKnown RBP12.58□□□□□ -0.4
SPG7-209ENST00000564047 CAAP1Q9H8G2 361 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 MLXIPLQ9NP71 852 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 NUDT4Q9NZJ9 180 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 TAAR2Q9P1P5 351 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 PDE10AQ9Y233 779 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 ASF1AQ9Y294 204 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 HEBP2Q9Y5Z4 205 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 CSNK1G3Q9Y6M4 447 aa12.58□□□□□ -0.4
SPG7-209ENST00000564047 SETXQ7Z333 2677 aaKnown RBP12.57□□□□□ -0.4
SPG7-209ENST00000564047 DMXL2Q8TDJ6 3036 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 A0A1B0GTQ1 180 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 PABPN1LA6NDY0 278 aaKnown RBP12.57□□□□□ -0.4
SPG7-209ENST00000564047 OR5K4A6NMS3 321 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 ARHGEF33A8MVX0 844 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 SUPT3HB4E1H0 165 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 YKT6O15498 198 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 FFAR2O15552 330 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 AQP9O43315 295 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 KLK8O60259 260 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 DLX3O60479 287 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 SUPT3HO75486 399 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 EML2O95834 649 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 CELA2BP08218 269 aaPredicted RBP12.57□□□□□ -0.4
SPG7-209ENST00000564047 SYPP08247 313 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms