RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 IGHV5-51A0A0C4DH38 117 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 CTAGE15A4D2H0 777 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 KRT87PA6NCN2 255 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 EFCAB7A8K855 629 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 B4E171 279 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 BTN3A1O00481 513 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 KPNA5O15131 536 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 PFDN6O15212 129 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 TOX3O15405 576 aaPredicted RBP8.29□□□□□ -1.08
UBR1-204ENST00000563239 PRAMEF10O60809 474 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 PIAS1O75925 651 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 C1orf105O95561 183 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 CTAGE8P0CG41 777 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 POLR2CP19387 275 aaPredicted RBP8.29□□□□□ -1.08
UBR1-204ENST00000563239 CHRM3P20309 590 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 ECHS1P30084 290 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 PEBP1P30086 187 aaKnown RBP8.29□□□□□ -1.08
UBR1-204ENST00000563239 SSTR1P30872 391 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 SLC5A2P31639 672 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 EIF2S3P41091 472 aaKnown RBP8.29□□□□□ -1.08
UBR1-204ENST00000563239 TSPAN7P41732 249 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 MLLT3P42568 568 aaPredicted RBP8.29□□□□□ -1.08
UBR1-204ENST00000563239 PGGT1BP53609 377 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 CDKN2DP55273 166 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 ERVPABLB-1P60509 514 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 MC2RQ01718 297 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 MGAT5Q09328 741 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 KRT33BQ14525 404 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 TMED2Q15363 201 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 KYNUQ16719 465 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 UBAP2Q5T6F2 1119 aaKnown RBP8.29□□□□□ -1.08
UBR1-204ENST00000563239 CACHD1Q5VU97 1274 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 IRGCQ6NXR0 463 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 FBXO38Q6PIJ6 1188 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 UNC5DQ6UXZ4 953 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 FAM92BQ6ZTR7 304 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 CTAGE6Q86UF2 777 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 AMIGO1Q86WK6 493 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 CTAGE4Q8IX94 777 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 LMNTD1Q8N9Z9 388 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 LINC01555Q8NAE3 123 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 MNS1Q8NEH6 495 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 GSDMBQ8TAX9 411 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 CD200R1Q8TD46 325 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 LCN9Q8WX39 176 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 KCNJ9Q92806 393 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 FGF11Q92914 225 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 USP7Q93009 1102 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 ZDHHC12Q96GR4 267 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 SLC41A2Q96JW4 573 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 NDNQ99608 321 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 GPR21Q99679 349 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 MAP3K3Q99759 626 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 SPRY4Q9C004 299 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 PHACTR1Q9C0D0 580 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 TRIT1Q9H3H1 467 aaKnown RBP8.29□□□□□ -1.08
UBR1-204ENST00000563239 SRMSQ9H3Y6 488 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 ZNF768Q9H5H4 540 aaKnown RBP8.29□□□□□ -1.08
UBR1-204ENST00000563239 SPHK1Q9NYA1 384 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 FOXJ2Q9P0K8 574 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 KLHL42Q9P2K6 505 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 CIDEBQ9UHD4 219 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 POMT2Q9UKY4 750 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 PLAGL1Q9UM63 463 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 TDRKHQ9Y2W6 561 aaKnown RBP8.29□□□□□ -1.08
UBR1-204ENST00000563239 DHRS7Q9Y394 339 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 PCDHGA7Q9Y5G6 932 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 COMMD10Q9Y6G5 202 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 ADAMTS20P59510 1910 aa8.29□□□□□ -1.08
UBR1-204ENST00000563239 A0A087WV48 116 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 TCRBV9S1A1TA0A576 114 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 ARHGEF33A8MVX0 844 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 CXorf49A8MYA2 514 aaPredicted RBP8.28□□□□□ -1.08
UBR1-204ENST00000563239 NVLO15381 856 aaKnown RBP8.28□□□□□ -1.08
UBR1-204ENST00000563239 JMJD7P0C870 316 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 NELFEP18615 380 aaKnown RBP8.28□□□□□ -1.08
UBR1-204ENST00000563239 CD9P21926 228 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 RBMS1P29558 406 aaKnown RBP8.28□□□□□ -1.08
UBR1-204ENST00000563239 PKLRP30613 574 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 CSTF2P33240 577 aaKnown RBP eCLIP8.28□□□□□ -1.08
UBR1-204ENST00000563239 MAGEA4P43358 317 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 BDKRB1P46663 353 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 PPM1FP49593 454 aaPredicted RBP8.28□□□□□ -1.08
UBR1-204ENST00000563239 SEPHS1P49903 392 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 MAPK10P53779 464 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 SH3BP2P78314 561 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 CUL1Q13616 776 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 KLHL38Q2WGJ6 581 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 GLE1Q53GS7 698 aaKnown RBP8.28□□□□□ -1.08
UBR1-204ENST00000563239 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.28□□□□□ -1.08
UBR1-204ENST00000563239 KLHL35Q6PF15 583 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 CAPN12Q6ZSI9 719 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 CYS1Q717R9 158 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 OOSP2Q86WS3 158 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 DCUN1D3Q8IWE4 304 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 CFAP61Q8NHU2 1237 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 DENND1AQ8TEH3 1009 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 PYROXD1Q8WU10 500 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 INPP5DQ92835 1189 aa8.28□□□□□ -1.08
UBR1-204ENST00000563239 IL17FQ96PD4 163 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms