RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 PHOSPHO2Q8TCD6 241 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 ADAMTS14Q8WXS8 1223 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 BADQ92934 168 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 DDOQ99489 341 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 MTERF1Q99551 399 aaKnown RBP3.65□□□□□ -1.83
HERC1-215ENST00000561436 API5Q9BZZ5 524 aaKnown RBP3.65□□□□□ -1.83
HERC1-215ENST00000561436 PORCNQ9H237 461 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 PCDH9Q9HC56 1237 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 BCCIPQ9P287 314 aaKnown RBP eCLIP3.65□□□□□ -1.83
HERC1-215ENST00000561436 PLAGL1Q9UM63 463 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 AMDHD2Q9Y303 409 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 NFS1Q9Y697 457 aa3.65□□□□□ -1.83
HERC1-215ENST00000561436 RBBP6Q7Z6E9 1792 aaKnown RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 CASP8AP2Q9UKL3 1982 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 ZBTB43O43298 467 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 BUD23O43709 281 aaKnown RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 DUSP11O75319 330 aaKnown RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 RFPL2O75678 378 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 CNMDO75829 334 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 RSL1D1O76021 490 aaKnown RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 TUBBP07437 444 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 ADRB2P07550 413 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 SUPT20HL2P0C7V6 817 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 MYBL1P10243 752 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 GNL1P36915 607 aaPredicted RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 PDE1BQ01064 536 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 Q0VFX4 171 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 OASLQ15646 514 aaKnown RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 CCL14Q16627 93 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 TCP11X2Q5H9J9 407 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 TMEM31Q5JXX7 168 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 CCDC158Q5M9N0 1113 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 C9orf50Q5SZB4 431 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 ADALQ6DHV7 355 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 ZNF517Q6ZMY9 492 aaPredicted RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 INTS8Q75QN2 995 aaKnown RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 HAUS6Q7Z4H7 955 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 ZDHHC17Q8IUH5 632 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 BEST3Q8N1M1 668 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 GUF1Q8N442 669 aaKnown RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 TTC30BQ8N4P2 665 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 KLHDC9Q8NEP7 349 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 UTP15Q8TED0 518 aaKnown RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 PTERQ96BW5 349 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 TMCO6Q96DC7 493 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 ERLEC1Q96DZ1 483 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 GRAMD2BQ96HH9 432 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 GLT1D1Q96MS3 346 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 ABHD1Q96SE0 405 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 TMEM204Q9BSN7 226 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 CCDC106Q9BWC9 280 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 SPATC1LQ9H0A9 340 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 DENND2DQ9H6A0 471 aaPredicted RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 WDR26Q9H7D7 661 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 SEBOXQ9HB31 216 aaPredicted RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 PAG1Q9NWQ8 432 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 TAS2R14Q9NYV8 317 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 RAI14Q9P0K7 980 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 HMG20BQ9P0W2 317 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 DDX25Q9UHL0 483 aaKnown RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 TINAGQ9UJW2 476 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 ZHX1Q9UKY1 873 aaPredicted RBP3.64□□□□□ -1.83
HERC1-215ENST00000561436 TBX21Q9UL17 535 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 PCDHA7Q9UN72 937 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 KLHL20Q9Y2M5 609 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 Q9Y3F1 56 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 ZNF711Q9Y462 761 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 PCDHGA5Q9Y5G8 931 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 RPS6KL1Q9Y6S9 549 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 FLT1P17948 1338 aa3.64□□□□□ -1.83
HERC1-215ENST00000561436 ZNF646O15015 1829 aaPredicted RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 CACNA1SQ13698 1873 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 IGKV2D-30A0A075B6S6 120 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 A0A0U1RQG5 324 aaPredicted RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 A0A1B0GUL7 405 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 TCRBV21S2A2A0A5A6 115 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 TMEM8BA6NDV4 472 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 C15orf62A8K5M9 175 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 ANKRD28O15084 1053 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 WDR46O15213 610 aaKnown RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 NDUFS4O43181 175 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 KCNAB3O43448 404 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 PRAMEF11O60813 436 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 AFPP02771 609 aaKnown RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 TRIM21P19474 475 aaKnown RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 UGT1A1P22309 533 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 TKTP29401 623 aaKnown RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 ARRB2P32121 409 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 RFC2P35250 354 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 CDKN2AP42771 156 aaKnown RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 THBS3P49746 956 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 COMPP49747 757 aaPredicted RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 ACLYP53396 1101 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 CTSCP53634 463 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 TIMM10P62072 90 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 SNRPEP62304 92 aaKnown RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 GABPAQ06546 454 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 DHX34Q14147 1143 aaKnown RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 ERMARDQ5T6L9 678 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 FAM69BQ5VUD6 431 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms