RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	CD63	P08962	238 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	AGXT	P21549	392 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	VARS	P26640	1264 aa	Known RBP	13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	NSG1	P42857	185 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	SOX8	P57073	446 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	PLOD1	Q02809	727 aa	Predicted RBP	13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	ZIC1	Q15915	447 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	DBN1	Q16643	649 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	PTCHD3	Q3KNS1	767 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	C4orf17	Q53FE4	359 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	RHBDD2	Q6NTF9	364 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	MICALCL	Q6ZW33	695 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	TBC1D21	Q8IYX1	336 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	TTC13	Q8NBP0	860 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	PNPLA2	Q96AD5	504 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	SPRTN	Q9H040	489 aa	Predicted RBP	13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	KLHL25	Q9H0H3	589 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	LRRC40	Q9H9A6	602 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	OR6C2	Q9NZP2	312 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	POLG2	Q9UHN1	485 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	PRSS21	Q9Y6M0	314 aa		13.19	□□□□□ -0.3
RNF31-223	ENST00000560754	MYO9A	B2RTY4	2548 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	TCP11X1	B4DZS4	312 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	QSOX1	O00391	747 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	SEMA7A	O75326	666 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	CBSL	P0DN79	551 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	UGT2B7	P16662	529 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	SHMT2	P34897	504 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	CBS	P35520	551 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	KLF1	Q13351	362 aa	Predicted RBP	13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	ITIH4	Q14624	930 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	IGFL3	Q6UXB1	125 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	PACS1	Q6VY07	963 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	ARHGEF18	Q6ZSZ5	1173 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	GPR135	Q8IZ08	494 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	DNAJC22	Q8N4W6	341 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	FAM71D	Q8N9W8	422 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	OR5AR1	Q8NGP9	310 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	OR5K2	Q8NHB8	316 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	SLC35B2	Q8TB61	432 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	GBP5	Q96PP8	586 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	C17orf62	Q9BQA9	187 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	SPHK1	Q9NYA1	384 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	GPR83	Q9NYM4	423 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	SMARCAL1	Q9NZC9	954 aa		13.18	□□□□□ -0.3
RNF31-223	ENST00000560754	NUP210L	Q5VU65	1888 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	NBPF19	A0A087WUL8	3843 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	MACROD2	A1Z1Q3	448 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	GRID2IP	A4D2P6	1211 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	WIPF3	A6NGB9	483 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	SOWAHD	A6NJG2	315 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754		A6NL46	340 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754		C9J4A7	227 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	OR2B3	O76000	313 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	AGFG2	O95081	481 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	AP2A1	O95782	977 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	ONECUT2	O95948	504 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	CHRM5	P08912	532 aa	Predicted RBP	13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	DCD	P81605	110 aa	Known RBP	13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	ATP1A4	Q13733	1029 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	POU6F1	Q14863	301 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	CRB2	Q5IJ48	1285 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	SLC6A19	Q695T7	634 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	MRPL14	Q6P1L8	145 aa	Known RBP	13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	TLDC1	Q6P9B6	456 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	LINC00523	Q86TU6	105 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	RAB43	Q86YS6	212 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	C19orf47	Q8N9M1	422 aa	Known RBP	13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	SSC4D	Q8WTU2	575 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	NACC2	Q96BF6	587 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	PTER	Q96BW5	349 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	SGSM3	Q96HU1	749 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	HGH1	Q9BTY7	390 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	SLC7A5P2	Q9GIP4	190 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	SLAMF7	Q9NQ25	335 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	G3BP2	Q9UN86	482 aa	Known RBP	13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	ASF1A	Q9Y294	204 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	PADI2	Q9Y2J8	665 aa		13.17	□□□□□ -0.3
RNF31-223	ENST00000560754	CREBBP	Q92793	2442 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	GOLGA6L9	A6NEM1	432 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	IGHE	P01854	428 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	FTH1	P02794	183 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	MSN	P26038	577 aa	Known RBP	13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	STIP1	P31948	543 aa	Known RBP	13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	FOXN2	P32314	431 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	GCGR	P47871	477 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	GDF10	P55107	478 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	NAP1L1	P55209	391 aa	Known RBP	13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	KIR2DS3	Q14952	304 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	SLC5A12	Q1EHB4	618 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	P3H1	Q32P28	736 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	DCAF10	Q5QP82	559 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	MLIP	Q5VWP3	458 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	LYPLAL1	Q5VWZ2	237 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	RAD9B	Q6WBX8	426 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	LURAP1L	Q8IV03	231 aa		13.16	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms