RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 BLOC1S4Q9NUP1 217 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 TMEM160Q9NX00 188 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 IFT80Q9P2H3 777 aaPredicted RBP6.17□□□□□ -1.42
HERC1-208ENST00000560462 HESX1Q9UBX0 185 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 TSPAN16Q9UKR8 245 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 TMEM98Q9Y2Y6 226 aa6.17□□□□□ -1.42
HERC1-208ENST00000560462 RYR1P21817 5038 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 UBA6A0AVT1 1052 aaPredicted RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 TUBAL3A6NHL2 446 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 VSTM5A8MXK1 200 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 SYT5O00445 386 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 CNOT3O75175 753 aaKnown RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 CTDNEP1O95476 244 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 ZBTB11O95625 1053 aaPredicted RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 TRUB2O95900 331 aaKnown RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 HBQ1P09105 142 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 SETSIPP0DME0 302 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 RBP3P10745 1247 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 GM2AP17900 193 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 OR1E1P30953 314 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 CCR1P32246 355 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 UBA7P41226 1012 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 ZFP36L2P47974 494 aaKnown RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 COMPP49747 757 aaPredicted RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 CYP2J2P51589 502 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 GEMIN4P57678 1058 aaKnown RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 TAP2Q03519 686 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 GBX1Q14549 363 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 C5orf22Q49AR2 442 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 DNTTIP2Q5QJE6 756 aaKnown RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 CFAP58Q5T655 872 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 SYPL2Q5VXT5 272 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 KIRREL2Q6UWL6 708 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 ZNF783Q6ZMS7 281 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 CHST15Q7LFX5 561 aaPredicted RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 TMC3Q7Z5M5 1100 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 WDR53Q7Z5U6 358 aaPredicted RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 TFAP2DQ7Z6R9 452 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 TMEM151BQ8IW70 566 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 LGI4Q8N135 537 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 LZTR1Q8N653 840 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 SLC4A11Q8NBS3 891 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 PPP1R14CQ8TAE6 165 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 HCAR2Q8TDS4 363 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 FNIP1Q8TF40 1166 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 RAD54LQ92698 747 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 NUS1Q96E22 293 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 ZNF396Q96N95 335 aaPredicted RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 MCMBPQ9BTE3 642 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 FGFBP2Q9BYJ0 223 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 RMI1Q9H9A7 625 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 SPTLC3Q9NUV7 552 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 SOHLH2Q9NX45 425 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 TAS2R14Q9NYV8 317 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 NOL7Q9UMY1 257 aaKnown RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 KCNK6Q9Y257 313 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 HS3ST3B1Q9Y662 390 aa6.16□□□□□ -1.42
HERC1-208ENST00000560462 EPN1Q9Y6I3 576 aaPredicted RBP6.16□□□□□ -1.42
HERC1-208ENST00000560462 CXorf51AA0A1B0GTR3 108 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 ILVBLA1L0T0 632 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 TSPAN11A1L157 253 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 ASPDHA6ND91 283 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 TMEM150CB9EJG8 249 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 ZNF749O43361 778 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 TCF21O43680 179 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 IGLV3-25P01717 112 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 CYP1A1P04798 512 aaPredicted RBP6.15□□□□□ -1.42
HERC1-208ENST00000560462 XRCC1P18887 633 aaPredicted RBP6.15□□□□□ -1.42
HERC1-208ENST00000560462 FPR1P21462 350 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 PIK3CAP42336 1068 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 RGS7P49802 495 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 ARSEP51690 589 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 RALGDSQ12967 914 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 VEZF1Q14119 521 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 GPR18Q14330 331 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 SLC9A5Q14940 896 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 TDRD12Q587J7 1177 aaKnown RBP6.15□□□□□ -1.42
HERC1-208ENST00000560462 ZNF789Q5FWF6 425 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 RAET1GQ6H3X3 334 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 HIBCHQ6NVY1 386 aaPredicted RBP6.15□□□□□ -1.42
HERC1-208ENST00000560462 BRAT1Q6PJG6 821 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 C22orf34Q6ZV56 151 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 OVCH1Q7RTY7 1134 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 LIX1LQ8IVB5 337 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 KBTBD2Q8IY47 623 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 SIRT6Q8N6T7 355 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 XXYLT1Q8NBI6 393 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 C1orf162Q8NEQ5 155 aaPredicted RBP6.15□□□□□ -1.42
HERC1-208ENST00000560462 OR5M3Q8NGP4 307 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 OR1L3Q8NH93 324 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 UBA3Q8TBC4 463 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 BRIX1Q8TDN6 353 aaKnown RBP6.15□□□□□ -1.42
HERC1-208ENST00000560462 PSMF1Q92530 271 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 LRRC46Q96FV0 321 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 FAXDC2Q96IV6 333 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 CD180Q99467 661 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 NCAPGQ9BPX3 1015 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 TRIM62Q9BVG3 475 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 TLR10Q9BXR5 811 aa6.15□□□□□ -1.42
HERC1-208ENST00000560462 CEP41Q9BYV8 373 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms