RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 STYXL1Q9Y6J8 313 aa1.95□□□□□ -2.1
SPG11-222ENST00000560435 KDM3AQ9Y4C1 1321 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 A0A1W2PQF6 199 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 GAPDHSO14556 408 aaPredicted RBP1.94□□□□□ -2.1
SPG11-222ENST00000560435 CDX4O14627 284 aaPredicted RBP1.94□□□□□ -2.1
SPG11-222ENST00000560435 HAT1O14929 419 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 TFECO14948 347 aaPredicted RBP1.94□□□□□ -2.1
SPG11-222ENST00000560435 PHF1O43189 567 aaPredicted RBP1.94□□□□□ -2.1
SPG11-222ENST00000560435 NDUFS3O75489 264 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 SEC14L2O76054 403 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 POP4O95707 220 aaKnown RBP1.94□□□□□ -2.1
SPG11-222ENST00000560435 LY6G6DO95868 133 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 RARSP54136 660 aaKnown RBP1.94□□□□□ -2.1
SPG11-222ENST00000560435 TLE2Q04725 743 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 PNRC1Q12796 327 aaPredicted RBP1.94□□□□□ -2.1
SPG11-222ENST00000560435 PLA2G7Q13093 441 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 GRTP1Q5TC63 336 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 RNLSQ5VYX0 342 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 CDHR3Q6ZTQ4 885 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 FAM131BQ86XD5 332 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 TSPYL6Q8N831 410 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 RHOXF1Q8NHV9 184 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 RNF128Q8TEB7 428 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 CALML4Q96GE6 196 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 SLC39A13Q96H72 371 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 NUDCD1Q96RS6 583 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 ISCA1Q9BUE6 129 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 TDRD1Q9BXT4 1180 aaKnown RBP1.94□□□□□ -2.1
SPG11-222ENST00000560435 HHATLQ9HCP6 504 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 PCDHB16Q9NRJ7 776 aa1.94□□□□□ -2.1
SPG11-222ENST00000560435 PRSS51A0A1B0GVH4 220 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 TRIM49BA6NDI0 452 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 AVILO75366 819 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 LMAN1P49257 510 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 CSNK2BP67870 215 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 CEBPZQ03701 1054 aaKnown RBP1.93□□□□□ -2.1
SPG11-222ENST00000560435 OS9Q13438 667 aaPredicted RBP1.93□□□□□ -2.1
SPG11-222ENST00000560435 MTF1Q14872 753 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 FAM182AQ5T1J6 154 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 INO80CQ6PI98 192 aaPredicted RBP1.93□□□□□ -2.1
SPG11-222ENST00000560435 TMEM207Q6UWW9 146 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 NKAPQ8N5F7 415 aaKnown RBP1.93□□□□□ -2.1
SPG11-222ENST00000560435 INTS12Q96CB8 462 aaKnown RBP1.93□□□□□ -2.1
SPG11-222ENST00000560435 MTERF3Q96E29 417 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 ATXN7L3BQ96GX2 97 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 NECTIN4Q96NY8 510 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 PIP5K1AQ99755 562 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 HGH1Q9BTY7 390 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 YTHDF1Q9BYJ9 559 aaKnown RBP1.93□□□□□ -2.1
SPG11-222ENST00000560435 GTSE1Q9NYZ3 720 aa1.93□□□□□ -2.1
SPG11-222ENST00000560435 OGG1O15527 345 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 NDUFS4O43181 175 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 TRAPPC10P48553 1259 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 CLCN4P51793 760 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 PDX1P52945 283 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 SQLEQ14534 574 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 TNIP1Q15025 636 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 EFTUD2Q15029 972 aaKnown RBP eCLIP1.92□□□□□ -2.1
SPG11-222ENST00000560435 DLG2Q15700 870 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 SLC25A53Q5H9E4 307 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 MDH1BQ5I0G3 518 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 CES4AQ5XG92 561 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 NOTUMQ6P988 496 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 TIPARPQ7Z3E1 657 aaKnown RBP1.92□□□□□ -2.1
SPG11-222ENST00000560435 ZC3H3Q8IXZ2 948 aaKnown RBP1.92□□□□□ -2.1
SPG11-222ENST00000560435 SAMD3Q8N6K7 520 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 CCDC185Q8N715 623 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 OR1L3Q8NH93 324 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 PHLDA1Q8WV24 401 aaPredicted RBP1.92□□□□□ -2.1
SPG11-222ENST00000560435 RNF125Q96EQ8 232 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 MAELQ96JY0 434 aaKnown RBP1.92□□□□□ -2.1
SPG11-222ENST00000560435 UBXN10Q96LJ8 280 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 ZNF597Q96LX8 424 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 SDHCQ99643 169 aaPredicted RBP1.92□□□□□ -2.1
SPG11-222ENST00000560435 MAP3K3Q99759 626 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 CHCHD5Q9BSY4 110 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 GPN1Q9HCN4 374 aaPredicted RBP1.92□□□□□ -2.1
SPG11-222ENST00000560435 B3GAT2Q9NPZ5 323 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 PPANQ9NQ55 473 aaKnown RBP1.92□□□□□ -2.1
SPG11-222ENST00000560435 ZNF701Q9NV72 531 aaPredicted RBP1.92□□□□□ -2.1
SPG11-222ENST00000560435 PLCL2Q9UPR0 1127 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 LYVE1Q9Y5Y7 322 aa1.92□□□□□ -2.1
SPG11-222ENST00000560435 IGHV4-30-2A0A087WSY4 118 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 EIF3FO00303 357 aaPredicted RBP1.91□□□□□ -2.1
SPG11-222ENST00000560435 PPM1GO15355 546 aaPredicted RBP1.91□□□□□ -2.1
SPG11-222ENST00000560435 GLRA3O75311 464 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 SLC2A2P11168 524 aaPredicted RBP1.91□□□□□ -2.1
SPG11-222ENST00000560435 EPHA8P29322 1005 aaPredicted RBP1.91□□□□□ -2.1
SPG11-222ENST00000560435 ICAM3P32942 547 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 RPS3AP61247 264 aaKnown RBP1.91□□□□□ -2.1
SPG11-222ENST00000560435 DMPKQ09013 629 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 TMEM115Q12893 351 aaPredicted RBP1.91□□□□□ -2.1
SPG11-222ENST00000560435 TRPC3Q13507 836 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 UBE4AQ14139 1066 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 C2orf83Q53S99 150 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 TRIML1Q8N9V2 468 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 ZNF285Q96NJ3 590 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 DACH2Q96NX9 599 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 THAP2Q9H0W7 228 aa1.91□□□□□ -2.1
SPG11-222ENST00000560435 PARLQ9H300 379 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms