RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 FARS2O95363 451 aaKnown RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 CXCR1P25024 350 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 GRIA2P42262 883 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 MAGEA3P43357 314 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ARHGAP8P85298 464 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 CNPY1Q3B7I2 92 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC8B1Q6J4K2 584 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 HID1Q8IV36 788 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 SPATA6LQ8N4H0 392 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZBTB2Q8N680 514 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 COPS5Q92905 334 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ORAI3Q9BRQ5 295 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ANKHQ9HCJ1 492 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 THUMPD1Q9NXG2 353 aaKnown RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 MT-CO2P00403 227 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC26A5P58743 744 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF670Q9BS34 389 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 AGO1Q9UL18 857 aaKnown RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 GLRA2P23416 452 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF619Q8N2I2 560 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 CBR4Q8N4T8 237 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 DNAJB8Q8NHS0 232 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC22A8Q8TCC7 542 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 H6PDO95479 791 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ERBB2P04626 1255 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 HMGN1P05114 100 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 SFTPBP07988 381 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 COL6A2P12110 1019 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 RPS12P25398 132 aaKnown RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 TSSK3Q96PN8 268 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 PHPT1Q9NRX4 125 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 GTF2F2P13984 249 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 MSX2P35548 267 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC15A1P46059 708 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF143P52747 638 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 TAS2R50P59544 299 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 SELENOVP59797 346 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 NIPAL1Q6NVV3 410 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ANKRD52Q8NB46 1076 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 OR51D1Q8NGF3 324 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZBED6CLQ96FA7 236 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 TUBA1CQ9BQE3 449 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 TM6SF2Q9BZW4 377 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 LCHNA4D1U4 455 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 hCG_2039718K7EN88 272 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 PLD2O14939 933 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 PCCBP05166 539 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZSCAN5DPP0CG00 497 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 HOXB9P17482 250 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 CD72P21854 359 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 ELOAQ14241 798 aaKnown RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 MINDY4Q4G0A6 757 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC22A16Q86VW1 577 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 OR56B2PQ8NGI1 322 aa13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 SAV1Q9H4B6 383 aaPredicted RBP13.62□□□□□ -0.23
CSPG4P12-202ENST00000559989 CCNHP51946 323 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 FOXO4P98177 505 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 C12orf40Q86WS4 652 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 KLHL6Q8WZ60 621 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 MYO19Q96H55 970 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 AGAP2Q99490 1192 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 ULBP1Q9BZM6 244 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 KIAA1522Q9P206 1035 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 NPIPA5E9PKD4 350 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 CSDE1O75534 798 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 ANXA4P09525 319 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 POU2F1P14859 743 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 FMO3P31513 532 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 BDH1Q02338 343 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 AUHQ13825 339 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 MOB2Q70IA6 237 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 LIX1Q8N485 282 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 ATG4CQ96DT6 458 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF578Q96N58 590 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 MRPL45Q9BRJ2 306 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 FN3KQ9H479 309 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF358Q9NW07 568 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 RABL2AQ9UBK7 228 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 NPIPA1Q9UND3 350 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 RABL2BQ9UNT1 228 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 BAZ2BQ9UIF8 2168 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D3DA0A087WVF3 549 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D3IA0A087WXS9 549 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D3EA0A087X179 549 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D3KA0A087X1G2 549 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D3FA6NER0 549 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D3LB9A6J9 549 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 CYP11A1P05108 521 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D3HP0C7X1 549 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 PLGLB1Q02325 96 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 AKR1C8PQ5T2L2 129 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 SWT1Q5T5J6 900 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D3GQ6DHY5 549 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D3CQ6IPX1 549 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 FAM183BPQ6ZVS7 135 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D3Q8IZP1 549 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 CRAMP1Q96RY5 1269 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 SEC14L4Q9UDX3 406 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 NLRP1Q9C000 1473 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms