RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 TNFAIP8L3Q5GJ75 292 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 RNF187Q5TA31 235 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 ZBTB37Q5TC79 503 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ARMC3Q5W041 872 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ZDHHC20Q5W0Z9 365 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 LYSMD4Q5XG99 296 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 TTC19Q6DKK2 380 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 TCEAL6Q6IPX3 200 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 FAM45BPQ6NSW5 357 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 NEK5Q6P3R8 708 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ZNF449Q6P9G9 518 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CERS6Q6ZMG9 384 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 MACC1Q6ZN28 852 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ZNF574Q6ZN55 896 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 MBOAT1Q6ZNC8 495 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 SH2D5Q6ZV89 423 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CBLL1Q75N03 491 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CEP68Q76N32 757 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 LPCAT2Q7L5N7 544 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CHST15Q7LFX5 561 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 ABI3BPQ7Z7G0 1075 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 HID1Q8IV36 788 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 PRSS33Q8NF86 280 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 OR56A4Q8NGH8 313 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 FAM45AQ8TCE6 357 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 HEXDCQ8WVB3 486 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 EEF1AKMT1Q8WVE0 214 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 GAB3Q8WWW8 586 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 JPH3Q8WXH2 748 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 ELMO1Q92556 727 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 TCEAL3Q969E4 200 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 PTERQ96BW5 349 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 NXNL1Q96CM4 212 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 MOCOSQ96EN8 888 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 PGM2Q96G03 612 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 PKNOX2Q96KN3 472 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ATP6V1G3Q96LB4 118 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 IER2Q9BTL4 223 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 MECRQ9BV79 373 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 C1QTNF7Q9BXJ2 289 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ROPN1BQ9BZX4 212 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 TMEM168Q9H0V1 697 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CDH19Q9H159 772 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 OSGEPL1Q9H4B0 414 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CARS2Q9HA77 564 aaKnown RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 ROPN1Q9HAT0 212 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 PHPT1Q9NRX4 125 aaPredicted RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 KLC4Q9NSK0 619 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 NSMCE4AQ9NXX6 385 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 GULP1Q9UBP9 304 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 KLQ9UEF7 1012 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 ZNHIT2Q9UHR6 403 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 TRMT6Q9UJA5 497 aaKnown RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 ADAMTS6Q9UKP5 1117 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 PSMD13Q9UNM6 376 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CDYLQ9Y232 598 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 SLC17A4Q9Y2C5 497 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 WDR37Q9Y2I8 494 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 VWA7Q9Y334 891 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 CFAP20Q9Y6A4 193 aaKnown RBP5.11□□□□□ -1.59
SPG11-220ENST00000559933 ADAMTS9Q9P2N4 1935 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 SPAG17Q6Q759 2223 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 GPR179Q6PRD1 2367 aa5.11□□□□□ -1.59
SPG11-220ENST00000559933 SPEGQ15772 3267 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TRBV23OR9-2A0A075B6M9 112 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TMEM120BA0PK00 339 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 NEMP2A6NFY4 417 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 LRRC14BA6NHZ5 514 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 NCF1BA6NI72 391 aaPredicted RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 NCF1CA8MVU1 366 aaPredicted RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 PRR33A8MZF0 331 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 PRAMEF26H0Y7S4 382 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 COPEO14579 308 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 CHUKO15111 745 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 POLR3GO15318 223 aaPredicted RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 GRID2O43424 1007 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TYROBPO43914 113 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 SNX2O60749 519 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 VPS26AO75436 327 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 POP7O75817 140 aaKnown RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 KRT37O76014 449 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 KRT38O76015 456 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 ESR1P03372 595 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 SBK3P0C264 359 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 OR56A5P0C7T3 313 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 CCDC166P0CW27 439 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 MYF5P13349 255 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 NCF1P14598 390 aaPredicted RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 BRAFP15056 766 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 ZNF37AP17032 561 aaPredicted RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 TFEBP19484 476 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 RPL10P27635 214 aaKnown RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 AOAHP28039 575 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 TEAD1P28347 426 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 HOXA6P31267 233 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 RPA3P35244 121 aaPredicted RBP5.1□□□□□ -1.59
SPG11-220ENST00000559933 NSG1P42857 185 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 CCR10P46092 362 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 KCNC1P48547 511 aa5.1□□□□□ -1.59
SPG11-220ENST00000559933 HK3P52790 923 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms