RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 SPXQ9BT56 116 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 FAM129AQ9BZQ8 928 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 GPR88Q9GZN0 384 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 MMP27Q9H306 513 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 THAP9Q9H5L6 903 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 UPF2Q9HAU5 1272 aaKnown RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 IL17BQ9UHF5 180 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 CDH7Q9ULB5 785 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 PLAGL1Q9UM63 463 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 WBP11Q9Y2W2 641 aaKnown RBP3.53□□□□□ -1.84
SPG11-218ENST00000559754 LIPGQ9Y5X9 500 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 TAF1P21675 1872 aa3.53□□□□□ -1.84
SPG11-218ENST00000559754 IGLV5-45A0A087WSX0 123 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 EDDM13A0A1B0GTR0 161 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 A0A1W2PR77 199 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 ANXA2P2A6NMY6 339 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 ENO4A6NNW6 628 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 PLOD2O00469 737 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 VCYO14598 125 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 HS3ST1O14792 307 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 IFIT3O14879 490 aaKnown RBP3.52□□□□□ -1.85
SPG11-218ENST00000559754 PGRMC2O15173 223 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 SYNGR3O43761 229 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 DIAPH2O60879 1101 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 DAB1O75553 588 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 NKX2-2O95096 273 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 GCNT3O95395 438 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 IGHV4-39P01824 125 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 SUPT20HL2P0C7V6 817 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 FAM106CPP0CH98 169 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 CASP3P42574 277 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 MTHFRP42898 656 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 TPD52P55327 224 aaPredicted RBP3.52□□□□□ -1.85
SPG11-218ENST00000559754 STARD6P59095 220 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 RALGDSQ12967 914 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 RPA4Q13156 261 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 CBX3Q13185 183 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 PPIGQ13427 754 aaKnown RBP eCLIP3.52□□□□□ -1.85
SPG11-218ENST00000559754 KCNC3Q14003 757 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 FCN2Q15485 313 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 ANKRD20A4Q4UJ75 823 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 ANKRD20A8PQ5CZ79 823 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 ANKRD20A2Q5SQ80 823 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 ANKRD20A1Q5TYW2 823 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 ANKRD20A3Q5VUR7 823 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 OR7E24Q6IFN5 339 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 FAM171BQ6P995 826 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 SLC27A1Q6PCB7 646 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 CEACAM20Q6UY09 585 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 SEPT14Q6ZU15 432 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 PLEKHM3Q6ZWE6 761 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 SPATA19Q7Z5L4 167 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 HAPLN4Q86UW8 402 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 AACSQ86V21 672 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 ATAD1Q8NBU5 361 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 KLHDC9Q8NEP7 349 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 CORO2AQ92828 525 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 TAAR8Q969N4 342 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 ST6GAL2Q96JF0 529 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 PPP1R13BQ96KQ4 1090 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 CEP295NLQ96MC4 621 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 PCGF1Q9BSM1 259 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 PIH1D3Q9NQM4 214 aaKnown RBP3.52□□□□□ -1.85
SPG11-218ENST00000559754 ACSS1Q9NUB1 689 aaPredicted RBP3.52□□□□□ -1.85
SPG11-218ENST00000559754 ABCB8Q9NUT2 735 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 INTS10Q9NVR2 710 aaKnown RBP3.52□□□□□ -1.85
SPG11-218ENST00000559754 CHCHD3Q9NX63 227 aaKnown RBP3.52□□□□□ -1.85
SPG11-218ENST00000559754 HAO2Q9NYQ3 351 aa3.52□□□□□ -1.85
SPG11-218ENST00000559754 DDX25Q9UHL0 483 aaKnown RBP3.52□□□□□ -1.85
SPG11-218ENST00000559754 XPO7Q9UIA9 1087 aaKnown RBP3.52□□□□□ -1.85
SPG11-218ENST00000559754 A0A087WV48 116 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 LNP1A1A4G5 178 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 HTR3EA5X5Y0 456 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 ANTXRLA6NF34 631 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 TRIM64CA6NLI5 447 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 PRPSAP2O60256 369 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 GPC4O75487 556 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 CAVIN2O95810 425 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 PENKP01210 267 aaPredicted RBP3.51□□□□□ -1.85
SPG11-218ENST00000559754 MMP9P14780 707 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 SUOXP51687 545 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 SLC12A3P55017 1021 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 HSD17B7P56937 341 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 STX1BP61266 288 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 ARF5P84085 180 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 MAD2L1Q13257 205 aaPredicted RBP3.51□□□□□ -1.85
SPG11-218ENST00000559754 LASP1Q14847 261 aaKnown RBP3.51□□□□□ -1.85
SPG11-218ENST00000559754 SNAPC1Q16533 368 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 DECR1Q16698 335 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 CBWD6Q4V339 395 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 CBWD3Q5JTY5 395 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 RARS2Q5T160 578 aaKnown RBP3.51□□□□□ -1.85
SPG11-218ENST00000559754 SFMBT2Q5VUG0 894 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 HIST2H2BDQ6DRA6 164 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 ARHGAP11AQ6P4F7 1023 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 CEP57Q86XR8 500 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 MAML2Q8IZL2 1156 aaPredicted RBP3.51□□□□□ -1.85
SPG11-218ENST00000559754 SYCP3Q8IZU3 236 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 BEST3Q8N1M1 668 aa3.51□□□□□ -1.85
SPG11-218ENST00000559754 HJURPQ8NCD3 748 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms