RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 ALDOAP04075 364 aaKnown RBP21.06■□□□□ 0.96
SNX1-206ENST00000559389 SLC35E2BP0CK96 405 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 CRABP2P29373 138 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 PKLRP30613 574 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 MAGEA12P43365 314 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 N4BP2L1Q5TBK1 243 aaPredicted RBP21.06■□□□□ 0.96
SNX1-206ENST00000559389 HES3Q5TGS1 186 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 RAB44Q7Z6P3 723 aaPredicted RBP21.06■□□□□ 0.96
SNX1-206ENST00000559389 FBXO15Q8NCQ5 510 aaPredicted RBP21.06■□□□□ 0.96
SNX1-206ENST00000559389 MAGEC3Q8TD91 643 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 LCN9Q8WX39 176 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 AHCYL2Q96HN2 611 aaKnown RBP21.06■□□□□ 0.96
SNX1-206ENST00000559389 NUDT22Q9BRQ3 303 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 PSMC3IPQ9P2W1 217 aaPredicted RBP21.06■□□□□ 0.96
SNX1-206ENST00000559389 ATXN7L1Q9ULK2 861 aaPredicted RBP21.06■□□□□ 0.96
SNX1-206ENST00000559389 CFAP54Q96N23 3096 aa21.06■□□□□ 0.96
SNX1-206ENST00000559389 KDM1AO60341 852 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 KRT37O76014 449 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 C8GP07360 202 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 TYRP1P17643 537 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 SHMT2P34897 504 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 PDX1P52945 283 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 CLDN6P56747 220 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 CFHR1Q03591 330 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 CCSMST1Q4G0I0 132 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 TTC23LQ6PF05 361 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 KLHL35Q6PF15 583 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 RBM44Q6ZP01 1051 aaKnown RBP21.05■□□□□ 0.96
SNX1-206ENST00000559389 MYRIPQ8NFW9 859 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 ANKRD7Q92527 254 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 RAD51AP1Q96B01 352 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 NRTNQ99748 197 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 XKR8Q9H6D3 395 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 RDH14Q9HBH5 336 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 ADAMTS6Q9UKP5 1117 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 IKZF3Q9UKT9 509 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 PLAGL1Q9UM63 463 aa21.05■□□□□ 0.96
SNX1-206ENST00000559389 MN1Q10571 1320 aaPredicted RBP21.04■□□□□ 0.96
SNX1-206ENST00000559389 KRT87PA6NCN2 255 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 OR5K3A6NET4 321 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 TRIM49D1C9J1S8 452 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 MYO1CO00159 1063 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 SLC16A5O15375 505 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 AMD1P17707 334 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 RAB28P51157 221 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 WDR74Q6RFH5 385 aaPredicted RBP21.04■□□□□ 0.96
SNX1-206ENST00000559389 RAPH1Q70E73 1250 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 USP53Q70EK8 1073 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 UBE2R2Q712K3 238 aaPredicted RBP21.04■□□□□ 0.96
SNX1-206ENST00000559389 TMPRSS9Q7Z410 1059 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 CCDC91Q7Z6B0 441 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 AMIGO1Q86WK6 493 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 OOSP2Q86WS3 158 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 TDRPQ86YL5 185 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 CNPY4Q8N129 248 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 OR4E2Q8NGC2 313 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 DLG3Q92796 817 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 UBXN10Q96LJ8 280 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 DPYSL5Q9BPU6 564 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 RAB11FIP5Q9BXF6 653 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 DERL2Q9GZP9 239 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 TWSG1Q9GZX9 223 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 RAB33BQ9H082 229 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 ZMYND15Q9H091 742 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 SRMSQ9H3Y6 488 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 EURLQ9NYK6 297 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 SPATA7Q9P0W8 599 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 CIDEBQ9UHD4 219 aa21.04■□□□□ 0.96
SNX1-206ENST00000559389 RASGRF2O14827 1237 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 ERLIN1O75477 346 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 MT-CO3P00414 261 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 SNRPAP09012 282 aaKnown RBP21.03■□□□□ 0.96
SNX1-206ENST00000559389 ERGP11308 486 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 GMPRP36959 345 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 PPM1FP49593 454 aaPredicted RBP21.03■□□□□ 0.96
SNX1-206ENST00000559389 RASA2Q15283 850 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 TAF1BQ53T94 588 aaPredicted RBP21.03■□□□□ 0.96
SNX1-206ENST00000559389 LGSNQ5TDP6 509 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 SLITRK4Q8IW52 837 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 DCBLD1Q8N8Z6 715 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 OR4D9Q8NGE8 314 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 OR2W6PQ8NHA6 318 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 EPS8L3Q8TE67 593 aaKnown RBP21.03■□□□□ 0.96
SNX1-206ENST00000559389 DENND1AQ8TEH3 1009 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 NCSTNQ92542 709 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 MTBPQ96DY7 904 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 IL17FQ96PD4 163 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 SLC12A9Q9BXP2 914 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 TMEM9Q9P0T7 183 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 CTNNAL1Q9UBT7 734 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 EPHA6Q9UF33 1036 aa21.03■□□□□ 0.96
SNX1-206ENST00000559389 A0A087X1B8 175 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 A0A096LPK6 155 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 OR6C74A6NCV1 312 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 NPEPPSL1A6NEC2 478 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 BTN3A1O00481 513 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 ZBTB14O43829 449 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 C9P02748 559 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 C2P06681 752 aa21.02■□□□□ 0.96
SNX1-206ENST00000559389 CCDC166P0CW27 439 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms