RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SBSNQ6UWP8 590 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 UNC5DQ6UXZ4 953 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 SLITRK4Q8IW52 837 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 FAM20CQ8IXL6 584 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 ADGRF3Q8IZF5 1079 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 MREGQ8N565 214 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.58□□□□□ -0.72
TPM1-217ENST00000559108 ISL2Q96A47 359 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 PTERQ96BW5 349 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 UBXN10Q96LJ8 280 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 PKP4Q99569 1192 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 ABCG4Q9H172 646 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 MVB12BQ9H7P6 319 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 SYNDIG1Q9H7V2 258 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 SNX15Q9NRS6 342 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 IGSF5Q9NSI5 407 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 ZNF180Q9UJW8 692 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 TDRKHQ9Y2W6 561 aaKnown RBP10.58□□□□□ -0.72
TPM1-217ENST00000559108 PCM1Q15154 2024 aa10.58□□□□□ -0.72
TPM1-217ENST00000559108 MN1Q10571 1320 aaPredicted RBP10.58□□□□□ -0.72
TPM1-217ENST00000559108 NCOR2Q9Y618 2525 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 IGHV5-10-1A0A0J9YXX1 117 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 A0A1W2PPV9 198 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 OR6C74A6NCV1 312 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 TRIM49D1C9J1S8 452 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 MYO1CO00159 1063 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 ZBTB14O43829 449 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 NRP2O60462 931 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 PRAMEF10O60809 474 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 RFPL1O75677 317 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 UBXN7O94888 489 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 C2P06681 752 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 PROS1P07225 676 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 NUDT17P0C025 328 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 CAPZBP47756 277 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 EPHA4P54764 986 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 RAB10P61026 200 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 PLOD1Q02809 727 aaPredicted RBP10.57□□□□□ -0.72
TPM1-217ENST00000559108 ZFP36L1Q07352 338 aaKnown RBP10.57□□□□□ -0.72
TPM1-217ENST00000559108 FOXC1Q12948 553 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 SQSTM1Q13501 440 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 C16orf72Q14CZ0 275 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 OR4D1Q15615 310 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 NEK10Q6ZWH5 1172 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 TRIM73Q86UV7 250 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 TAX1BP1Q86VP1 789 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 DCUN1D3Q8IWE4 304 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 LRRC56Q8IYG6 542 aaPredicted RBP10.57□□□□□ -0.72
TPM1-217ENST00000559108 TBC1D21Q8IYX1 336 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 C2orf73Q8N5S3 287 aaPredicted RBP10.57□□□□□ -0.72
TPM1-217ENST00000559108 DCBLD1Q8N8Z6 715 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 RCBTB1Q8NDN9 531 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 OR4E2Q8NGC2 313 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 OR6C4Q8NGE1 309 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 OR10G6Q8NH81 332 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 KCTD4Q8WVF5 259 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 SKA2Q8WVK7 121 aaPredicted RBP10.57□□□□□ -0.72
TPM1-217ENST00000559108 PMEPA1Q969W9 287 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 GPR78Q96P69 363 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 TRIT1Q9H3H1 467 aaKnown RBP10.57□□□□□ -0.72
TPM1-217ENST00000559108 TFB2MQ9H5Q4 396 aaKnown RBP10.57□□□□□ -0.72
TPM1-217ENST00000559108 GPAMQ9HCL2 828 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 ZNF358Q9NW07 568 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.57□□□□□ -0.72
TPM1-217ENST00000559108 TXNDC16Q9P2K2 825 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 PDE10AQ9Y233 779 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 ENTPD2Q9Y5L3 495 aa10.57□□□□□ -0.72
TPM1-217ENST00000559108 HEATR5BQ9P2D3 2071 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 A0A1W2PPM1 405 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 OR5K3A6NET4 321 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 SMIM23A6NLE4 172 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 F8W8V4 182 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 EIF3FO00303 357 aaPredicted RBP10.56□□□□□ -0.72
TPM1-217ENST00000559108 PRICKLE3O43900 615 aaPredicted RBP10.56□□□□□ -0.72
TPM1-217ENST00000559108 CSO75390 466 aaKnown RBP10.56□□□□□ -0.72
TPM1-217ENST00000559108 CPNE6O95741 557 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 MT-CO3P00414 261 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 C9P02748 559 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 INHBAP08476 426 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 CCDC166P0CW27 439 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 CBSLP0DN79 551 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 THRAP10827 490 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 ERGP11308 486 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 ENO3P13929 434 aaPredicted RBP10.56□□□□□ -0.72
TPM1-217ENST00000559108 PVRP15151 417 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 CD1DP15813 335 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 POLR2CP19387 275 aaPredicted RBP10.56□□□□□ -0.72
TPM1-217ENST00000559108 PSMB5P28074 263 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 IMPA1P29218 277 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 CBSP35520 551 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 SKIV2L2P42285 1042 aaKnown RBP10.56□□□□□ -0.72
TPM1-217ENST00000559108 MSH2P43246 934 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 KPNA2P52292 529 aaKnown RBP10.56□□□□□ -0.72
TPM1-217ENST00000559108 CAMK2BQ13554 666 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 PLCL1Q15111 1095 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 TSNQ15631 228 aaKnown RBP10.56□□□□□ -0.72
TPM1-217ENST00000559108 ISXQ2M1V0 245 aa10.56□□□□□ -0.72
TPM1-217ENST00000559108 C18orf21Q32NC0 220 aaPredicted RBP10.56□□□□□ -0.72
TPM1-217ENST00000559108 TTLL9Q3SXZ7 439 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms