RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TSSK1BQ9BXA7 367 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 RAB33BQ9H082 229 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 ACSS3Q9H6R3 686 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 CAB39LQ9H9S4 337 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 ASCL3Q9NQ33 180 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 SIDT1Q9NXL6 827 aaKnown RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 EPHA6Q9UF33 1036 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 MTRF1LQ9UGC7 380 aaKnown RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 CORO1CQ9ULV4 474 aaPredicted RBP11.1□□□□□ -0.63
SNX1-204ENST00000559061 SATB2Q9UPW6 733 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 VWA7Q9Y334 891 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 HEBP2Q9Y5Z4 205 aa11.1□□□□□ -0.63
SNX1-204ENST00000559061 ANKRD12Q6UB98 2062 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 A0A1W2PPV9 198 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 OR6C74A6NCV1 312 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 TRABD2BA6NFA1 517 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 E5RI56 91 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 GFYI3L273 518 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 MYO1CO00159 1063 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 KPNA5O15131 536 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 PFDN6O15212 129 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 PRICKLE3O43900 615 aaPredicted RBP11.09□□□□□ -0.63
SNX1-204ENST00000559061 VPS26AO75436 327 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 SPAG6O75602 509 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 SLU7O95391 586 aaKnown RBP11.09□□□□□ -0.63
SNX1-204ENST00000559061 MPOP05164 745 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 MPC1LP0DKB6 136 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 CCL4P13236 92 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 ZNF37AP17032 561 aaPredicted RBP11.09□□□□□ -0.63
SNX1-204ENST00000559061 ITIH1P19827 911 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 NDUFS1P28331 727 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 STX2P32856 288 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 GP5P40197 560 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 RTP5Q14D33 572 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 ZKSCAN8Q15776 578 aaPredicted RBP11.09□□□□□ -0.63
SNX1-204ENST00000559061 UAP1Q16222 522 aaPredicted RBP11.09□□□□□ -0.63
SNX1-204ENST00000559061 FAM45BPQ6NSW5 357 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 FAM92BQ6ZTR7 304 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 PRSS42Q7Z5A4 293 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 DCUN1D3Q8IWE4 304 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 FAM20CQ8IXL6 584 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 LRRC56Q8IYG6 542 aaPredicted RBP11.09□□□□□ -0.63
SNX1-204ENST00000559061 EIF1ADQ8N9N8 165 aaKnown RBP11.09□□□□□ -0.63
SNX1-204ENST00000559061 UHMK1Q8TAS1 419 aaKnown RBP11.09□□□□□ -0.63
SNX1-204ENST00000559061 FAM45AQ8TCE6 357 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 ASB11Q8WXH4 323 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 ELMO2Q96JJ3 720 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 TGM7Q96PF1 710 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 CPNE1Q99829 537 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 DHRS4Q9BTZ2 278 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 TRIT1Q9H3H1 467 aaKnown RBP11.09□□□□□ -0.63
SNX1-204ENST00000559061 EPB41L1Q9H4G0 881 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 STN1Q9H668 368 aaKnown RBP11.09□□□□□ -0.63
SNX1-204ENST00000559061 OCIAD1Q9NX40 245 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 KLHL3Q9UH77 587 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 POMT2Q9UKY4 750 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 COLEC10Q9Y6Z7 277 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 SDK2Q58EX2 2172 aa11.09□□□□□ -0.63
SNX1-204ENST00000559061 IGHV5-51A0A0C4DH38 117 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 F8W8V4 182 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 TAF4O00268 1085 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 PHGDHO43175 533 aaKnown RBP11.08□□□□□ -0.64
SNX1-204ENST00000559061 RIPK2O43353 540 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 PRAMEF10O60809 474 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 CHRM5P08912 532 aaPredicted RBP11.08□□□□□ -0.64
SNX1-204ENST00000559061 ANKRD34CP0C6C1 535 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 FGF3P11487 239 aaPredicted RBP11.08□□□□□ -0.64
SNX1-204ENST00000559061 POLR2CP19387 275 aaPredicted RBP11.08□□□□□ -0.64
SNX1-204ENST00000559061 YBX1P67809 324 aaKnown RBP11.08□□□□□ -0.64
SNX1-204ENST00000559061 DLG1Q12959 904 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 BIRC2Q13490 618 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 BMPR2Q13873 1038 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 FASTKQ14296 549 aaKnown RBP11.08□□□□□ -0.64
SNX1-204ENST00000559061 PLCL1Q15111 1095 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 PHKG1Q16816 387 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 C3orf38Q5JPI3 329 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 PHF19Q5T6S3 580 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 SBSNQ6UWP8 590 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 MBOAT1Q6ZNC8 495 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 CMC1Q7Z7K0 106 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 TRIM73Q86UV7 250 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 AMIGO1Q86WK6 493 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 MDM1Q8TC05 714 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 DCAKDQ8WVC6 231 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 LCN9Q8WX39 176 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 KLHL6Q8WZ60 621 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 LINGO1Q96FE5 620 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 TMEM74Q96NL1 305 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 OR2A14Q96R47 310 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 PKP4Q99569 1192 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 MAP3K3Q99759 626 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 PITPNM3Q9BZ71 974 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 NRSN2Q9GZP1 204 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 CCDC68Q9H2F9 335 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 ZNF768Q9H5H4 540 aaKnown RBP11.08□□□□□ -0.64
SNX1-204ENST00000559061 RRAGDQ9NQL2 400 aaPredicted RBP11.08□□□□□ -0.64
SNX1-204ENST00000559061 HRASLS2Q9NWW9 162 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 TAS2R13Q9NYV9 303 aa11.08□□□□□ -0.64
SNX1-204ENST00000559061 TRMT6Q9UJA5 497 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms