RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 CTSBP07858 339 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 UGT2B7P16662 529 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 PSMA3P25788 255 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 OTX2P32243 289 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 SHMT2P34897 504 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 RWDD2BP57060 319 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 CACNG1Q06432 222 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 PARP6Q2NL67 630 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 SKOR2Q2VWA4 1001 aaPredicted RBP15.4■□□□□ 0.06
SCFD1-224ENST00000557713 VWA5B1Q5TIE3 1220 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 MLIPQ5VWP3 458 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 MRGPREQ86SM8 312 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 ALG3Q92685 438 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 LRRC45Q96CN5 670 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 CALR3Q96L12 384 aaKnown RBP15.4■□□□□ 0.06
SCFD1-224ENST00000557713 GBP5Q96PP8 586 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 C17orf62Q9BQA9 187 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 SLC29A3Q9BZD2 475 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 CASS4Q9NQ75 786 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 SPHK1Q9NYA1 384 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 SMARCAL1Q9NZC9 954 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 POLG2Q9UHN1 485 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 DUSP10Q9Y6W6 482 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 PRRC2CQ9Y520 2896 aaKnown RBP15.4■□□□□ 0.06
SCFD1-224ENST00000557713 ICE1Q9Y2F5 2266 aa15.4■□□□□ 0.06
SCFD1-224ENST00000557713 WIPF3A6NGB9 483 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 KRT86O43790 486 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 ZNF189O75820 626 aaPredicted RBP15.39■□□□□ 0.05
SCFD1-224ENST00000557713 TJP3O95049 919 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 CBX6O95503 412 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 CHRM5P08912 532 aaPredicted RBP15.39■□□□□ 0.05
SCFD1-224ENST00000557713 CD63P08962 238 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 NSG1P42857 185 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 SOX8P57073 446 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 DCDP81605 110 aaKnown RBP15.39■□□□□ 0.05
SCFD1-224ENST00000557713 DCAF10Q5QP82 559 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 C1orf189Q5VU69 101 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 MRPL14Q6P1L8 145 aaKnown RBP15.39■□□□□ 0.05
SCFD1-224ENST00000557713 IGFL3Q6UXB1 125 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 HOOK3Q86VS8 718 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 TMTC1Q8IUR5 882 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 TBC1D21Q8IYX1 336 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 PRR7Q8TB68 274 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 STYXQ8WUJ0 223 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 N4BP2L2Q92802 583 aaPredicted RBP15.39■□□□□ 0.05
SCFD1-224ENST00000557713 SNRNP40Q96DI7 357 aaKnown RBP15.39■□□□□ 0.05
SCFD1-224ENST00000557713 FER1L6-AS2Q96M78 137 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 ZNF552Q9H707 407 aaPredicted RBP15.39■□□□□ 0.05
SCFD1-224ENST00000557713 LUC7LQ9NQ29 371 aaKnown RBP15.39■□□□□ 0.05
SCFD1-224ENST00000557713 ASF1AQ9Y294 204 aa15.39■□□□□ 0.05
SCFD1-224ENST00000557713 PTRH2Q9Y3E5 179 aaKnown RBP15.39■□□□□ 0.05
SCFD1-224ENST00000557713 A0A0J9YY10 115 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 SLC5A10A0PJK1 596 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 MROH6A6NGR9 719 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 BHMG1C9JSJ3 638 aaPredicted RBP15.38■□□□□ 0.05
SCFD1-224ENST00000557713 CNOT3O75175 753 aaKnown RBP15.38■□□□□ 0.05
SCFD1-224ENST00000557713 IGHEP01854 428 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 CYLC1P35663 651 aaPredicted RBP15.38■□□□□ 0.05
SCFD1-224ENST00000557713 FOLR3P41439 243 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 ITIH4Q14624 930 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 POU6F1Q14863 301 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 MYBPC3Q14896 1274 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 KYNUQ16719 465 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 DEFB110Q30KQ9 67 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 CRB2Q5IJ48 1285 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 PACS1Q6VY07 963 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 ARHGEF18Q6ZSZ5 1173 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 TMEM151BQ8IW70 566 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 IQCKQ8N0W5 287 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 GALNT16Q8N428 558 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 DNAJC22Q8N4W6 341 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 OR2Y1Q8NGV0 311 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 OR5K2Q8NHB8 316 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 PROKR1Q8TCW9 393 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 ELMO1Q92556 727 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 AP1M1Q9BXS5 423 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 LRRC40Q9H9A6 602 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 ASF1BQ9NVP2 202 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 OR6C2Q9NZP2 312 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 MAP10Q9P2G4 905 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 IFT80Q9P2H3 777 aaPredicted RBP15.38■□□□□ 0.05
SCFD1-224ENST00000557713 DHCR7Q9UBM7 475 aaKnown RBP15.38■□□□□ 0.05
SCFD1-224ENST00000557713 GPN3Q9UHW5 284 aaPredicted RBP15.38■□□□□ 0.05
SCFD1-224ENST00000557713 CDYLQ9Y232 598 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 B3GNT3Q9Y2A9 372 aa15.38■□□□□ 0.05
SCFD1-224ENST00000557713 EPN1Q9Y6I3 576 aaPredicted RBP15.38■□□□□ 0.05
SCFD1-224ENST00000557713 QSOX1O00391 747 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 PEX12O00623 359 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 AP2A1O95782 977 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 FTH1P02794 183 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 PEBP1P30086 187 aaKnown RBP15.37■□□□□ 0.05
SCFD1-224ENST00000557713 CETN2P41208 172 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 GCGRP47871 477 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 BRD3Q15059 726 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 SLC5A12Q1EHB4 618 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 TLDC1Q6P9B6 456 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 NAPRTQ6XQN6 538 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 PPP1R32Q7Z5V6 425 aa15.37■□□□□ 0.05
SCFD1-224ENST00000557713 CISD2Q8N5K1 135 aaKnown RBP15.37■□□□□ 0.05
SCFD1-224ENST00000557713 ZNF655Q8N720 491 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms