RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 CCHCR1Q8TD31 782 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 MAML1Q92585 1016 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 INPP5DQ92835 1189 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 GLYATL1Q969I3 302 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 ZNF501Q96CX3 271 aaPredicted RBP5.7□□□□□ -1.5
VPS33B-207ENST00000557470 LRGUKQ96M69 825 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 PPM1MQ96MI6 270 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 ZSCAN5AQ9BUG6 496 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 NLNQ9BYT8 704 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 YY1AP1Q9H869 796 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 KCND1Q9NSA2 647 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 RBM22Q9NW64 420 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS33B-207ENST00000557470 TMPRSS11EQ9UL52 423 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 SHOC2Q9UQ13 582 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 B3GNT3Q9Y2A9 372 aa5.7□□□□□ -1.5
VPS33B-207ENST00000557470 TNPO3Q9Y5L0 923 aaKnown RBP5.7□□□□□ -1.5
VPS33B-207ENST00000557470 A0A1W2PRQ8 180 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 UBA6A0AVT1 1052 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 OR5K3A6NET4 321 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 ANKRD66B4E2M5 251 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 HNRNPRO43390 633 aaKnown RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 VEGFDO43915 354 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 CDK14O94921 469 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 LCA5LO95447 670 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 FTLP02792 175 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 KLK3P07288 261 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 CAPN1P07384 714 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 CD48P09326 243 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 CCDC172P0C7W6 258 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 PIRTP0C851 137 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 FERP16591 822 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 BPIP17213 487 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 VCLP18206 1134 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 CA5AP35218 305 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 RORAP35398 523 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 RRADP55042 308 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 GSDMDP57764 484 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 SLC25A11Q02978 314 aaKnown RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 UBXN1Q04323 297 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 ABRQ12979 859 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 GALEQ14376 348 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 GALNT3Q14435 633 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 KRT81Q14533 505 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 PLCL1Q15111 1095 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 PDCD2Q16342 344 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 RPE65Q16518 533 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 KYNUQ16719 465 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 CRB2Q5IJ48 1285 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 NKAPLQ5M9Q1 402 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 FAM182AQ5T1J6 154 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 YOD1Q5VVQ6 348 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 NCBP2-AS2Q69YL0 99 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 PDPK2PQ6A1A2 396 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 TIGD7Q6NT04 549 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 PPP1R2P3Q6NXS1 205 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 KLHL35Q6PF15 583 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 FBXO38Q6PIJ6 1188 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 FAM83HQ6ZRV2 1179 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 MRGPREQ86SM8 312 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 MYLK4Q86YV6 388 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 TRAPPC5Q8IUR0 188 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 SYTL1Q8IYJ3 562 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 DSELQ8IZU8 1212 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 OR8K5Q8NH50 307 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 TEKT4Q8WW24 435 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 CPT1BQ92523 772 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 FATE1Q969F0 183 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 TRIM63Q969Q1 353 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 MOCOSQ96EN8 888 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 LRFN5Q96NI6 719 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 ERGIC2Q96RQ1 377 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 TRIB3Q96RU7 358 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 CD180Q99467 661 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 BARD1Q99728 777 aaKnown RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 AARSD1Q9BTE6 412 aaKnown RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 NUP85Q9BW27 656 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 TLR10Q9BXR5 811 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 ADGRE3Q9BY15 652 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 ILKAPQ9H0C8 392 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 SOHLH2Q9NX45 425 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 C5AR2Q9P296 337 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 NFKBIL1Q9UBC1 381 aaPredicted RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 MYO1AQ9UBC5 1043 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 AMACRQ9UHK6 382 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 PCDHB10Q9UN67 800 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 PSMD13Q9UNM6 376 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 ENTPD4Q9Y227 616 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 NTNG1Q9Y2I2 539 aa5.69□□□□□ -1.5
VPS33B-207ENST00000557470 COPG1Q9Y678 874 aaKnown RBP5.69□□□□□ -1.5
VPS33B-207ENST00000557470 AKAP9Q99996 3911 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 SPTBP11277 2137 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 OR6C74A6NCV1 312 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 TMEM150CB9EJG8 249 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 MASP2O00187 686 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 DDX3XO00571 662 aaKnown RBP eCLIP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 LRRTM2O43300 516 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 ZG16O60844 167 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 PRKD3O94806 890 aa5.68□□□□□ -1.5
VPS33B-207ENST00000557470 ZBTB11O95625 1053 aaPredicted RBP5.68□□□□□ -1.5
VPS33B-207ENST00000557470 ALPPP05187 535 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms