RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 OARD1Q9Y530 152 aa15.95■□□□□ 0.14
SHMT2-231ENST00000557433 SAGE2PA6NJ88 616 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 CLDN24A6NM45 220 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 OR1I1O60431 355 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 ITGB1P05556 798 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 CNPP09543 421 aaKnown RBP15.94■□□□□ 0.14
SHMT2-231ENST00000557433 PIK3CGP48736 1102 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 TUBA1BP68363 451 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 NPTX1Q15818 432 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 ADPRMQ3LIE5 342 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 VARS2Q5ST30 1063 aaKnown RBP15.94■□□□□ 0.14
SHMT2-231ENST00000557433 CPZQ66K79 652 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 NADSYN1Q6IA69 706 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 TUBA1AQ71U36 451 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 CYP2U1Q7Z449 544 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 HS3ST5Q8IZT8 346 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 CADM3Q8N126 398 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 PGBD3Q8N328 593 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 LPCAT1Q8NF37 534 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 FCGR1BQ92637 280 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 OR52E6Q96RD3 313 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 CDK5RAP1Q96SZ6 601 aaKnown RBP15.94■□□□□ 0.14
SHMT2-231ENST00000557433 C19orf43Q9BQ61 176 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 NTMT1Q9BV86 223 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 FAM126AQ9BYI3 521 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-231ENST00000557433 LRTM1Q9HBL6 345 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 TM9SF3Q9HD45 589 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 FLRT1Q9NZU1 646 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 ANKMY1Q9P2S6 941 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 ANGPTL3Q9Y5C1 460 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 PCDHGA10Q9Y5H3 936 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 ANKRD66B4E2M5 251 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 PER2O15055 1255 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 ULK1O75385 1050 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 CCNDBP1O95273 360 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 SERPINA1P01009 418 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 EBLN1P0CF75 366 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 CDKN1CP49918 316 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-231ENST00000557433 GZMMP51124 257 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 PPP5CP53041 499 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 PIGFQ07326 219 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 RAPSNQ13702 412 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 TTLL9Q3SXZ7 439 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 SPANXN4Q5MJ08 99 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 PERM1Q5SV97 790 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 DET1Q7L5Y6 550 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 B3GNT8Q7Z7M8 397 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 DCBLD1Q8N8Z6 715 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 FRS2Q8WU20 508 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 ITCHQ96J02 903 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 HEPHQ9BQS7 1158 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 AGO1Q9UL18 857 aaKnown RBP15.94■□□□□ 0.14
SHMT2-231ENST00000557433 A3GALT2U3KPV4 340 aa15.94■□□□□ 0.14
SHMT2-231ENST00000557433 H0Y626 953 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 RGS10O43665 173 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 TRIM16O95361 564 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 BMP4P12644 408 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 CD52P31358 61 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 LAPTM5Q13571 262 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 CLCA4Q14CN2 919 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 SDHAF4Q5VUM1 108 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 GDF6Q6KF10 455 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-231ENST00000557433 BTLAQ7Z6A9 289 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 TMEM179BQ7Z7N9 219 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 TSPYL5Q86VY4 417 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-231ENST00000557433 CHPFQ8IZ52 775 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 LIX1Q8N485 282 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 NLGN2Q8NFZ4 835 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 SPATA17Q96L03 361 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 IKZF5Q9H5V7 419 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 ERVK-18Q9QC07 812 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 OPTCQ9UBM4 332 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 UGT2A1Q9Y4X1 527 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 RAI2Q9Y5P3 530 aa15.93■□□□□ 0.14
SHMT2-231ENST00000557433 CHD5Q8TDI0 1954 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 ILVBLA1L0T0 632 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 SYN3O14994 580 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 TBX18O95935 607 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 PRPS2P11908 318 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 ZNF7P17097 686 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-231ENST00000557433 DGKAP23743 735 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 UGT2B10P36537 528 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 GPR15P49685 360 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 CLDN8P56748 225 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 PTGR1Q14914 329 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 PAGE2BQ5JRK9 111 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 KDM4DQ6B0I6 523 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 GCNT7Q6ZNI0 430 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 TAS2R42Q7RTR8 314 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 SNX20Q7Z614 316 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 ZDHHC21Q8IVQ6 265 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 KIAA1958Q8N8K9 716 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 RHOXF1Q8NHV9 184 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 CNIH3Q8TBE1 160 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 USP7Q93009 1102 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 ADAM2Q99965 735 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 TBCDQ9BTW9 1192 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 CD244Q9BZW8 370 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 SARS2Q9NP81 518 aaKnown RBP15.92■□□□□ 0.14
SHMT2-231ENST00000557433 PKP3Q9Y446 797 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms