RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 FOXJ2Q9P0K8 574 aa12.12□□□□□ -0.47
SLIRP-209ENST00000557342 POMT2Q9UKY4 750 aa12.12□□□□□ -0.47
SLIRP-209ENST00000557342 ICKQ9UPZ9 632 aa12.12□□□□□ -0.47
SLIRP-209ENST00000557342 B3GALT1Q9Y5Z6 326 aa12.12□□□□□ -0.47
SLIRP-209ENST00000557342 ASPMQ8IZT6 3477 aa12.12□□□□□ -0.47
SLIRP-209ENST00000557342 FRYQ5TBA9 3013 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 WDFY3Q8IZQ1 3526 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 IGHV5-51A0A0C4DH38 117 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 PIPSLA2A3N6 862 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-209ENST00000557342 STMND1H3BQB6 276 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 BTN3A3O00478 584 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 BTN3A1O00481 513 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 KLK10O43240 276 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 MAP3K7O43318 606 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 VPS26AO75436 327 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 HAUS5O94927 633 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 ZBTB11O95625 1053 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-209ENST00000557342 CDH3P22223 829 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 PRDX3P30048 256 aaKnown RBP12.11□□□□□ -0.47
SLIRP-209ENST00000557342 CARSP49589 748 aaKnown RBP12.11□□□□□ -0.47
SLIRP-209ENST00000557342 KPNA2P52292 529 aaKnown RBP12.11□□□□□ -0.47
SLIRP-209ENST00000557342 UCNP55089 124 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 HSD11B2P80365 405 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 MPP1Q00013 466 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 ACY1Q03154 408 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 FOXM1Q08050 763 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 GBX1Q14549 363 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 KYNUQ16719 465 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 TMTC4Q5T4D3 741 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 TEDDM1Q5T9Z0 273 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 ANKS6Q68DC2 871 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 CNSTQ6PJW8 725 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 NEK10Q6ZWH5 1172 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 BPHLQ86WA6 291 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-209ENST00000557342 ANKMY2Q8IV38 441 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 SPACA3Q8IXA5 215 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 ZBED8Q8IZ13 594 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 ADGRF3Q8IZF5 1079 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 FBXO36Q8NEA4 188 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 PYROXD1Q8WU10 500 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 HNRNPLLQ8WVV9 542 aaKnown RBP12.11□□□□□ -0.47
SLIRP-209ENST00000557342 INPP5DQ92835 1189 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 RAD51AP1Q96B01 352 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 SLC41A2Q96JW4 573 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 AARSD1Q9BTE6 412 aaKnown RBP12.11□□□□□ -0.47
SLIRP-209ENST00000557342 PHACTR1Q9C0D0 580 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 XKR8Q9H6D3 395 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 ACTR10Q9NZ32 417 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 CORO1CQ9ULV4 474 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-209ENST00000557342 DHRS7Q9Y394 339 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 APC2O95996 2303 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 IGF2RP11717 2491 aa12.11□□□□□ -0.47
SLIRP-209ENST00000557342 EIF3FO00303 357 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-209ENST00000557342 MATN4O95460 622 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 C1orf105O95561 183 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 CBSLP0DN79 551 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 ENO3P13929 434 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-209ENST00000557342 CBSP35520 551 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 SKIV2L2P42285 1042 aaKnown RBP12.1□□□□□ -0.47
SLIRP-209ENST00000557342 ATP1A2P50993 1020 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 RAB28P51157 221 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 CLCN7P51798 805 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 PLTPP55058 493 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 ILF2Q12905 390 aaKnown RBP12.1□□□□□ -0.47
SLIRP-209ENST00000557342 CLN3Q13286 438 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 LRRC8EQ6NSJ5 796 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 ZNF549Q6P9A3 640 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 PALM2Q8IXS6 379 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 D2HGDHQ8N465 521 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 SLC22A18Q96BI1 424 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 FAM136AQ96C01 138 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 OR6C1Q96RD1 312 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 WDR83Q9BRX9 315 aaKnown RBP12.1□□□□□ -0.47
SLIRP-209ENST00000557342 SYTL2Q9HCH5 934 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 PDE7BQ9NP56 450 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 SAYSD1Q9NPB0 183 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 SOHLH2Q9NX45 425 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 NSMCE4AQ9NXX6 385 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 GRHL1Q9NZI5 618 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 GALPQ9UBC7 116 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 SLC39A10Q9ULF5 831 aa12.1□□□□□ -0.47
SLIRP-209ENST00000557342 SNRNP200O75643 2136 aaKnown RBP12.1□□□□□ -0.47
SLIRP-209ENST00000557342 CTAGE15A4D2H0 777 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 RASGRF2O14827 1237 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 AHSGP02765 367 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 CATP04040 527 aaKnown RBP12.09□□□□□ -0.47
SLIRP-209ENST00000557342 CHRM5P08912 532 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-209ENST00000557342 GSTA2P09210 222 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 CTAGE8P0CG41 777 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 MPC1LP0DKB6 136 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 FGF5P12034 268 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 CD9P21926 228 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 ITPKBP27987 946 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 PKLRP30613 574 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 TMPRSS3P57727 454 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 SH3BP2P78314 561 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 TLE3Q04726 772 aa12.09□□□□□ -0.47
SLIRP-209ENST00000557342 MGAT5Q09328 741 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms