RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 NADK2Q4G0N4 442 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 CCDC38Q502W7 563 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 FAM69BQ5VUD6 431 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 LYPLAL1Q5VWZ2 237 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 FAM198BQ6UWH4 519 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 ZBTB2Q8N680 514 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 EFCAB3Q8N7B9 438 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 HES6Q96HZ4 224 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 OR2A14Q96R47 310 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 DHRS4Q9BTZ2 278 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 CHRNA10Q9GZZ6 450 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 OR6C2Q9NZP2 312 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 VPS4AQ9UN37 437 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 G3BP2Q9UN86 482 aaKnown RBP15.36■□□□□ 0.05
TUBB3-213ENST00000557262 TDRKHQ9Y2W6 561 aaKnown RBP15.36■□□□□ 0.05
TUBB3-213ENST00000557262 AP1M2Q9Y6Q5 423 aa15.36■□□□□ 0.05
TUBB3-213ENST00000557262 HEATR9A2RTY3 570 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 C9J4A7 227 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 F8W8V4 182 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 ZNF185O15231 689 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 KDM1AO60341 852 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 OR2B3O76000 313 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 CHRM5P08912 532 aaPredicted RBP15.35■□□□□ 0.05
TUBB3-213ENST00000557262 TPBGLP0DKB5 382 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 FDFT1P37268 417 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 RRADP55042 308 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 NCF4Q15080 339 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 ZNF385CQ66K41 422 aaPredicted RBP15.35■□□□□ 0.05
TUBB3-213ENST00000557262 NAPRTQ6XQN6 538 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 HPS6Q86YV9 775 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 TMEM139Q8IV31 216 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 C19orf47Q8N9M1 422 aaKnown RBP15.35■□□□□ 0.05
TUBB3-213ENST00000557262 GLIS1Q8NBF1 620 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 GALNT11Q8NCW6 608 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 OR5K2Q8NHB8 316 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 CPT1CQ8TCG5 803 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 HDAC10Q969S8 669 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 C17orf62Q9BQA9 187 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 SPRTNQ9H040 489 aaPredicted RBP15.35■□□□□ 0.05
TUBB3-213ENST00000557262 ETNK1Q9HBU6 452 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 SPHK1Q9NYA1 384 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 RIMKLBQ9ULI2 386 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 PADI2Q9Y2J8 665 aa15.35■□□□□ 0.05
TUBB3-213ENST00000557262 SEC16AO15027 2179 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 MED13Q9UHV7 2174 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 A0A0U1RQJ8 604 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 H3BMH7 237 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 OR1I1O60431 355 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 DPM1O60762 260 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 SUN1O94901 812 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 GOT2P00505 430 aaKnown RBP15.34■□□□□ 0.05
TUBB3-213ENST00000557262 CD63P08962 238 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 CBSLP0DN79 551 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 GP1BBP13224 206 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 ADRA1DP25100 572 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 CBSP35520 551 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 GABRA4P48169 554 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 SSPNQ14714 243 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 ZIC1Q15915 447 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 SYTL3Q4VX76 610 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 TSTD2Q5T7W7 516 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 MLIPQ5VWP3 458 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 RHBDD2Q6NTF9 364 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 PPP1R21Q6ZMI0 780 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 TRIM73Q86UV7 250 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 RAB43Q86YS6 212 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 FDCSPQ8NFU4 85 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 OR13J1Q8NGT2 312 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 FLVCR1-AS1Q8TAF5 88 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 UBE2Q2Q8WVN8 375 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 ATG4AQ8WYN0 398 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 IP6K3Q96PC2 410 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 RANBP9Q96S59 729 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 FRMD8P1Q9BZ68 369 aaPredicted RBP15.34■□□□□ 0.05
TUBB3-213ENST00000557262 IMPACTQ9P2X3 320 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 MAP4K5Q9Y4K4 846 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 TNRC6AQ8NDV7 1962 aaKnown RBP15.34■□□□□ 0.05
TUBB3-213ENST00000557262 PIKFYVEQ9Y2I7 2098 aa15.34■□□□□ 0.05
TUBB3-213ENST00000557262 A0A0J9YY10 115 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 A6NL46 340 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 ISM1B1AKI9 464 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 E7EVH7 732 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 LIASO43766 372 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 KLF7O75840 302 aaPredicted RBP15.33■□□□□ 0.04
TUBB3-213ENST00000557262 PPARGP37231 505 aaPredicted RBP15.33■□□□□ 0.04
TUBB3-213ENST00000557262 DCDP81605 110 aaKnown RBP15.33■□□□□ 0.04
TUBB3-213ENST00000557262 KIR2DS3Q14952 304 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 OASLQ15646 514 aaKnown RBP15.33■□□□□ 0.04
TUBB3-213ENST00000557262 SLC5A12Q1EHB4 618 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 TLDC1Q6P9B6 456 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 AFTPHQ6ULP2 937 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 DNAJC22Q8N4W6 341 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 RNF10Q8N5U6 811 aaKnown RBP15.33■□□□□ 0.04
TUBB3-213ENST00000557262 OR6P1Q8NGX9 317 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 OR4L1Q8NH43 312 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 SGSM3Q96HU1 749 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 PSMG3-AS1Q96PY0 264 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 DESI2Q9BSY9 194 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 NUDT9Q9BW91 350 aa15.33■□□□□ 0.04
TUBB3-213ENST00000557262 SLC2A6Q9UGQ3 507 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms