RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 FBXL2Q9UKC9 423 aa2.8□□□□□ -1.96
SCFD1-218ENST00000556256 ABCA7Q8IZY2 2146 aa2.8□□□□□ -1.96
SCFD1-218ENST00000556256 ASTN2O75129 1339 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-218ENST00000556256 FLT1P17948 1338 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 LOC100509620A0A075B734 347 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 GPR75-ASB3A0A0A6YYF3 556 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 A8MV72 311 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-218ENST00000556256 UBE2CO00762 179 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 HS3ST1O14792 307 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 AVILO75366 819 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 CREG1O75629 220 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 RSL1D1O76021 490 aaKnown RBP2.79□□□□□ -1.96
SCFD1-218ENST00000556256 WISP2O76076 250 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 PDE9AO76083 593 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 DNTTP04053 509 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 GNAZP19086 355 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 SAT1P21673 171 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 ITGA3P26006 1051 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 PTGER3P43115 390 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 STAT2P52630 851 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 MLLT10P55197 1068 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 KCNJ10P78508 379 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 NAA16Q6N069 864 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-218ENST00000556256 RPUSD3Q6P087 351 aaKnown RBP2.79□□□□□ -1.96
SCFD1-218ENST00000556256 PAQR6Q6TCH4 344 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 Q6ZR54 194 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 DENND5BQ6ZUT9 1274 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 ZNF534Q76KX8 674 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 SLC44A1Q8WWI5 657 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 TMCO6Q96DC7 493 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 GCNAQ96QF7 691 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 TXLNGYQ9BZA5 131 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 DNAJC18Q9H819 358 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 ARHGEF38Q9NXL2 777 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 CRNNQ9UBG3 495 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-218ENST00000556256 AMACRQ9UHK6 382 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 DBNLQ9UJU6 430 aaKnown RBP2.79□□□□□ -1.96
SCFD1-218ENST00000556256 MAGED1Q9Y5V3 778 aaPredicted RBP2.79□□□□□ -1.96
SCFD1-218ENST00000556256 FAM169AQ9Y6X4 670 aa2.79□□□□□ -1.96
SCFD1-218ENST00000556256 SYNDIG1LA6NDD5 238 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 SLCO1B7G3V0H7 640 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 HMBSP08397 361 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 CEBPBP17676 345 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 SIRPAP78324 504 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 COX10Q12887 443 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 GAGE2BQ13066 116 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 GAGE2EQ4V326 116 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 BMP2KLQ5H9B9 411 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 GPR139Q6DWJ6 353 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 GAGE2AQ6NT46 116 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 SLC30A6Q6NXT4 461 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 PLXDC2Q6UX71 529 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 GALNT13Q8IUC8 556 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 TMTC2Q8N394 836 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 GUF1Q8N442 669 aaKnown RBP2.78□□□□□ -1.96
SCFD1-218ENST00000556256 EMC1Q8N766 993 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 SYT2Q8N9I0 419 aaPredicted RBP2.78□□□□□ -1.96
SCFD1-218ENST00000556256 GSDMBQ8TAX9 411 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 OMA1Q96E52 524 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 DDOQ99489 341 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 SYT15Q9BQS2 421 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 HGH1Q9BTY7 390 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 RTN4RQ9BZR6 473 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 LAT2Q9GZY6 243 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 MMP27Q9H306 513 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 KCNK15Q9H427 330 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 GDE1Q9NZC3 331 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 RCC2Q9P258 522 aaKnown RBP2.78□□□□□ -1.96
SCFD1-218ENST00000556256 LARSQ9P2J5 1176 aaKnown RBP2.78□□□□□ -1.96
SCFD1-218ENST00000556256 GAGE2DQ9UEU5 116 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 ANAPC2Q9UJX6 822 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 ZNF148Q9UQR1 794 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 B3GALT5Q9Y2C3 310 aa2.78□□□□□ -1.96
SCFD1-218ENST00000556256 OR2M5A3KFT3 312 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 OR5K3A6NET4 321 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 J3QR06 171 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 NDUFS4O43181 175 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 IGKV3-15P01624 115 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 CBLP22681 906 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 NR2F2P24468 414 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 NMBRP28336 390 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 KRT20P35900 424 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 ARSEP51690 589 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 CTSCP53634 463 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 TMF1P82094 1093 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 MEP1AQ16819 746 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 ERMARDQ5T6L9 678 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 MFSD4BQ5TF39 518 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 ADALQ6DHV7 355 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 DHRS7BQ6IAN0 325 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-218ENST00000556256 INTS8Q75QN2 995 aaKnown RBP2.77□□□□□ -1.97
SCFD1-218ENST00000556256 HAUS6Q7Z4H7 955 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 LDB1Q86U70 411 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-218ENST00000556256 CEP57Q86XR8 500 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 Q8N377 158 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 SLC5A8Q8N695 610 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 AVL9Q8NBF6 648 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 ZPLD1Q8TCW7 415 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 UTP15Q8TED0 518 aaKnown RBP2.77□□□□□ -1.97
SCFD1-218ENST00000556256 DNAAF4Q8WXU2 420 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms