RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 USP34Q70CQ2 3546 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 ARHGEF33A8MVX0 844 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 FOXO6A8MYZ6 492 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 HMGB1P1B2RPK0 211 aaPredicted RBP12.18□□□□□ -0.46
ABCD4-223ENST00000555904 GFYI3L273 518 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 AGPSO00116 658 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 CDC7O00311 574 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 KERAO60938 352 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 LDOC1O95751 146 aaPredicted RBP12.18□□□□□ -0.46
ABCD4-223ENST00000555904 GIMD1P0DJR0 217 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 SHMT2P34897 504 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 CRHR1P34998 444 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 HSD17B2P37059 387 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 BDKRB1P46663 353 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 UBE2IP63279 158 aaKnown RBP12.18□□□□□ -0.46
ABCD4-223ENST00000555904 GPR18Q14330 331 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 CCDC153Q494R4 210 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 AGBL2Q5U5Z8 902 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 KLHL35Q6PF15 583 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 CYHR1Q6ZMK1 362 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 DBX2Q6ZNG2 339 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 CLEC14AQ86T13 490 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 CCDC63Q8NA47 563 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 FBXO15Q8NCQ5 510 aaPredicted RBP12.18□□□□□ -0.46
ABCD4-223ENST00000555904 RHEBL1Q8TAI7 183 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 LCN9Q8WX39 176 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 ATL1Q8WXF7 558 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 EXT2Q93063 718 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 CNDP2Q96KP4 475 aaKnown RBP12.18□□□□□ -0.46
ABCD4-223ENST00000555904 ATP6V1G3Q96LB4 118 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 CDC6Q99741 560 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 MRPL57Q9BQC6 102 aaKnown RBP12.18□□□□□ -0.46
ABCD4-223ENST00000555904 MRPL46Q9H2W6 279 aaKnown RBP12.18□□□□□ -0.46
ABCD4-223ENST00000555904 UCK1Q9HA47 277 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 MKS1Q9NXB0 559 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 UTP6Q9NYH9 597 aaKnown RBP12.18□□□□□ -0.46
ABCD4-223ENST00000555904 LRIT1Q9P2V4 623 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 ADAMTS6Q9UKP5 1117 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 BTBD3Q9Y2F9 522 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 OARD1Q9Y530 152 aa12.18□□□□□ -0.46
ABCD4-223ENST00000555904 TMEM131Q92545 1883 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 MYO15AQ9UKN7 3530 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 CPED1A4D0V7 1026 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SUPT3HB4E1H0 165 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 GDF9O60383 454 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SMIM24O75264 130 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SUPT3HO75486 399 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 GUCA1CO95843 209 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 ANXA5P08758 320 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 CKMT1AP12532 417 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 CD59P13987 128 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 TAC1P20366 129 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 GMPRP36959 345 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 LIMK1P53667 647 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 MAGOHP61326 146 aaKnown RBP12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SLC18A2Q05940 514 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 DLG1Q12959 904 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.17□□□□□ -0.46
ABCD4-223ENST00000555904 N4BP2L1Q5TBK1 243 aaPredicted RBP12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SBSNQ6UWP8 590 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 TMEM26Q6ZUK4 368 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 ISCA2Q86U28 154 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 EXOC3L1Q86VI1 746 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 C17orf82Q86X59 251 aaPredicted RBP12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SPNS2Q8IVW8 549 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SFTPA2Q8IWL1 248 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 KIAA2013Q8IYS2 634 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 PLD6Q8N2A8 252 aaKnown RBP12.17□□□□□ -0.46
ABCD4-223ENST00000555904 BANPQ8N9N5 519 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 OR52E1Q8NGJ3 308 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 OR9A1PQ8NGU1 263 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 NETO1Q8TDF5 533 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 PTERQ96BW5 349 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 AHCYL2Q96HN2 611 aaKnown RBP12.17□□□□□ -0.46
ABCD4-223ENST00000555904 CCDC138Q96M89 665 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 CAMK1GQ96NX5 476 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SH3GL2Q99962 352 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SRMSQ9H3Y6 488 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SLC32A1Q9H598 525 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 SSU72Q9NP77 194 aaKnown RBP12.17□□□□□ -0.46
ABCD4-223ENST00000555904 KCNK9Q9NPC2 374 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 MED4Q9NPJ6 270 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 KCNK4Q9NYG8 393 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 CD274Q9NZQ7 290 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 XPR1Q9UBH6 696 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 MID2Q9UJV3 735 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 TMCO1Q9UM00 188 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 PDE10AQ9Y233 779 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 RNF215Q9Y6U7 377 aa12.17□□□□□ -0.46
ABCD4-223ENST00000555904 FRYLO94915 3013 aa12.16□□□□□ -0.46
ABCD4-223ENST00000555904 FAM221BA6H8Z2 402 aa12.16□□□□□ -0.46
ABCD4-223ENST00000555904 NCF1BA6NI72 391 aaPredicted RBP12.16□□□□□ -0.46
ABCD4-223ENST00000555904 LILRA5A6NI73 299 aa12.16□□□□□ -0.46
ABCD4-223ENST00000555904 NCF1CA8MVU1 366 aaPredicted RBP12.16□□□□□ -0.46
ABCD4-223ENST00000555904 MYO1CO00159 1063 aa12.16□□□□□ -0.46
ABCD4-223ENST00000555904 SH3BP5O60239 455 aa12.16□□□□□ -0.46
ABCD4-223ENST00000555904 SPAG7O75391 227 aa12.16□□□□□ -0.46
ABCD4-223ENST00000555904 TOP3BO95985 862 aaKnown RBP12.16□□□□□ -0.46
ABCD4-223ENST00000555904 TPBGLP0DKB5 382 aa12.16□□□□□ -0.46
ABCD4-223ENST00000555904 GFAPP14136 432 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms