RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, human

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUBB3-208	ENST00000555576	CCDC110	Q8TBZ0	833 aa		12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	TFG	Q92734	400 aa	Predicted RBP	12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	SGSM3	Q96HU1	749 aa		12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	TBL1Y	Q9BQ87	522 aa		12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	ZNF552	Q9H707	407 aa	Predicted RBP	12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	ASF1B	Q9NVP2	202 aa		12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	SPHK1	Q9NYA1	384 aa		12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	G3BP2	Q9UN86	482 aa	Known RBP	12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	B3GNT3	Q9Y2A9	372 aa		12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	EFR3B	Q9Y2G0	817 aa		12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	ANKRD12	Q6UB98	2062 aa		12.81	□□□□□ -0.36
TUBB3-208	ENST00000555576	MASP2	O00187	686 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	KCNN4	O15554	427 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	OR2B3	O76000	313 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	UMOD	P07911	640 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	GSTM1	P09488	218 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	RBP3	P10745	1247 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	ITGAX	P20702	1163 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	AGXT	P21549	392 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	COL8A1	P27658	744 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	PEBP1	P30086	187 aa	Known RBP	12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	DCT	P40126	519 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	SOX8	P57073	446 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	COPS2	P61201	443 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	GSTM4	Q03013	218 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	SPARCL1	Q14515	664 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	DBN1	Q16643	649 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	C1orf189	Q5VU69	101 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	UNC5A	Q6ZN44	842 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	CNGA4	Q8IV77	575 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	GALNT16	Q8N428	558 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	OR2Y1	Q8NGV0	311 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	PROKR1	Q8TCW9	393 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	IP6K3	Q96PC2	410 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	FAM118B	Q9BPY3	351 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	C17orf62	Q9BQA9	187 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	ANP32E	Q9BTT0	268 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	SPRTN	Q9H040	489 aa	Predicted RBP	12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	VPS37B	Q9H9H4	285 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	ZBTB20	Q9HC78	741 aa	Predicted RBP	12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	SLC22A11	Q9NSA0	550 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	NLE1	Q9NVX2	485 aa	Predicted RBP	12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	NTNG1	Q9Y2I2	539 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	PCDHGA10	Q9Y5H3	936 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	PRSS21	Q9Y6M0	314 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	AP1M2	Q9Y6Q5	423 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	AKAP9	Q99996	3911 aa		12.8	□□□□□ -0.36
TUBB3-208	ENST00000555576	AKR1B15	C9JRZ8	316 aa	Predicted RBP	12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	ZSCAN9	O15535	394 aa	Predicted RBP	12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	CHRM5	P08912	532 aa	Predicted RBP	12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	TPM1	P09493	284 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	SHMT2	P34897	504 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	MAGEA1	P43355	309 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	EIF3E	P60228	445 aa	Known RBP	12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	ZRANB3	Q5FWF4	1079 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576		Q6ZS92	163 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	CUZD1	Q86UP6	607 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	GPR135	Q8IZ08	494 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	DNAJC22	Q8N4W6	341 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	CISD2	Q8N5K1	135 aa	Known RBP	12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	TC2N	Q8N9U0	490 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	FER1L6-AS2	Q96M78	137 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	MENT	Q9BUN1	341 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	OSBPL8	Q9BZF1	889 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	SLC7A5P2	Q9GIP4	190 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	P4HTM	Q9NXG6	502 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	DHCR7	Q9UBM7	475 aa	Known RBP	12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	CDYL	Q9Y232	598 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	PTRH2	Q9Y3E5	179 aa	Known RBP	12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	PCDHA3	Q9Y5H8	950 aa		12.79	□□□□□ -0.36
TUBB3-208	ENST00000555576	OTOG	Q6ZRI0	2925 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576		A0A0J9YY10	115 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	SLC5A10	A0PJK1	596 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	MACROD2	A1Z1Q3	448 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	BHMG1	C9JSJ3	638 aa	Predicted RBP	12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	LIN7A	O14910	233 aa	Predicted RBP	12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	MAP3K7	O43318	606 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	AP2A2	O94973	939 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	FOLR3	P41439	243 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	DCD	P81605	110 aa	Known RBP	12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	PRPSAP1	Q14558	356 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	SLC9A5	Q14940	896 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	KYNU	Q16719	465 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	NKAIN1	Q4KMZ8	207 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	MLIP	Q5VWP3	458 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	AADACL2	Q6P093	401 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	PACS1	Q6VY07	963 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	TICAM1	Q8IUC6	712 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	TBC1D21	Q8IYX1	336 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	ZNF655	Q8N720	491 aa	Predicted RBP	12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	CLEC1A	Q8NC01	280 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	OR5K2	Q8NHB8	316 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	ALG3	Q92685	438 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	CDKN2AIPNL	Q96HQ2	116 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	PPP1R2P1	Q96PQ5	205 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	OR6C2	Q9NZP2	312 aa		12.78	□□□□□ -0.36
TUBB3-208	ENST00000555576	MAP10	Q9P2G4	905 aa		12.78	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms