RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 ACPTQ9BZG2 426 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 YIPF3Q9GZM5 350 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 Q9H521 79 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 LRTM1Q9HBL6 345 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 ITM2BQ9Y287 266 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 CROCCQ5TZA2 2017 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 DYTNA2CJ06 578 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 C16orf96A6NNT2 1141 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 AP1G1O43747 822 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 PDYNP01213 254 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 BMP2P12643 396 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 DGKGP49619 791 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 METAP1P53582 386 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 PRKCQQ04759 706 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 UBE3AQ05086 875 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 TECPR1Q7Z6L1 1165 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 KRTCAP2Q8N6L1 136 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 ANKFN1Q8N957 763 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 ZNF597Q96LX8 424 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 SLC29A3Q9BZD2 475 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 FAM8A1Q9UBU6 413 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 PRKAG2Q9UGJ0 569 aa23.71■■□□□ 1.39
TMEM260-207ENST00000555497 EIF3LQ9Y262 564 aaKnown RBP23.71■■□□□ 1.39
TMEM260-207ENST00000555497 KCNE1BA0A087WTH5 132 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 GRXCR2A6NFK2 248 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 INPP4BO15327 924 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 HRH2P25021 359 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 VIPR2P41587 438 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 MTPNP58546 118 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 INPP5AQ14642 412 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 IMPG1Q17R60 797 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 LRRC70Q7Z2Q7 622 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 TRAM1L1Q8N609 369 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 C12orf76Q8N812 135 aaPredicted RBP23.7■■□□□ 1.38
TMEM260-207ENST00000555497 DDHD1Q8NEL9 900 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 CGREF1Q99674 301 aa23.7■■□□□ 1.38
TMEM260-207ENST00000555497 DUS2Q9NX74 493 aaKnown RBP23.7■■□□□ 1.38
TMEM260-207ENST00000555497 EME2A4GXA9 379 aaPredicted RBP23.69■■□□□ 1.38
TMEM260-207ENST00000555497 FAM149AA5PLN7 773 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 SLC9A3R1O14745 358 aaPredicted RBP23.69■■□□□ 1.38
TMEM260-207ENST00000555497 TPST1O60507 370 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 ADH5P11766 374 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 CALRP27797 417 aaKnown RBP23.69■■□□□ 1.38
TMEM260-207ENST00000555497 HSPA13P48723 471 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 NEK2P51955 445 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 GRIN2CQ14957 1233 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 PSRC1Q6PGN9 363 aaPredicted RBP23.69■■□□□ 1.38
TMEM260-207ENST00000555497 DPPA4Q7L190 304 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 RASGRP3Q8IV61 690 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 C5orf42Q9H799 3197 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 CDH23Q9H251 3354 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 C5orf67F2Z3F1 127 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 SOCS2O14508 198 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 HIST1H2AGP0C0S8 130 aaPredicted RBP23.69■■□□□ 1.38
TMEM260-207ENST00000555497 HIST1H2ADP20671 130 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 HTR1EP28566 365 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 CYP51A1Q16850 503 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 SMU1Q2TAY7 513 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 ST13P4Q8IZP2 240 aaPredicted RBP23.69■■□□□ 1.38
TMEM260-207ENST00000555497 GOLM1Q8NBJ4 401 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 ST13P5Q8NFI4 369 aaPredicted RBP23.69■■□□□ 1.38
TMEM260-207ENST00000555497 HIST1H2AHQ96KK5 128 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 HIST1H2AJQ99878 128 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 H2AFJQ9BTM1 129 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 RPF2Q9H7B2 306 aaKnown RBP23.69■■□□□ 1.38
TMEM260-207ENST00000555497 SLC22A14Q9Y267 594 aa23.69■■□□□ 1.38
TMEM260-207ENST00000555497 ZNF197O14709 1029 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 HNRNPRO43390 633 aaKnown RBP23.68■■□□□ 1.38
TMEM260-207ENST00000555497 SMIM18P0DKX4 95 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 PSMA4P25789 261 aaKnown RBP23.68■■□□□ 1.38
TMEM260-207ENST00000555497 MMP12P39900 470 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 CTSCP53634 463 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 MYBPC1Q00872 1141 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 PWP1Q13610 501 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 FXNQ16595 210 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 FAM174BQ3ZCQ3 159 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 USP39Q53GS9 565 aaKnown RBP23.68■■□□□ 1.38
TMEM260-207ENST00000555497 LIPIQ6XZB0 460 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 PARS2Q7L3T8 475 aaKnown RBP23.68■■□□□ 1.38
TMEM260-207ENST00000555497 LILRA3Q8N6C8 439 aaPredicted RBP23.68■■□□□ 1.38
TMEM260-207ENST00000555497 CELF5Q8N6W0 485 aaKnown RBP23.68■■□□□ 1.38
TMEM260-207ENST00000555497 CLHC1Q8NHS4 586 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 BTN2A2Q8WVV5 523 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 FOXJ1Q92949 421 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 NXPE3Q969Y0 559 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 ATG10Q9H0Y0 220 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 MUC13Q9H3R2 512 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 AGPAT4Q9NRZ5 378 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 C1orf109Q9NX04 203 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 VAPAQ9P0L0 249 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 DKK3Q9UBP4 350 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 CFAP99D6REC4 459 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 H0YJX3 145 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 IFRD1O00458 451 aaPredicted RBP23.68■■□□□ 1.38
TMEM260-207ENST00000555497 DFNA5O60443 496 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 XPAP23025 273 aaPredicted RBP23.68■■□□□ 1.38
TMEM260-207ENST00000555497 ITPKAP23677 461 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 MAD2L1Q13257 205 aaPredicted RBP23.68■■□□□ 1.38
TMEM260-207ENST00000555497 SPANXN4Q5MJ08 99 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 TTC23LQ6PF05 361 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms