RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 MNS1Q8NEH6 495 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 MAGEC3Q8TD91 643 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 OR6C1Q96RD1 312 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 MAP3K3Q99759 626 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 CTRCQ99895 268 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 FANCEQ9HB96 536 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 PDE7BQ9NP56 450 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 OR6C2Q9NZP2 312 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 WHRNQ9P202 907 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 TSR3Q9UJK0 312 aaKnown RBP11.75□□□□□ -0.53
SRP54-206ENST00000555317 FBXO5Q9UKT4 447 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 POMT2Q9UKY4 750 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 SLC39A10Q9ULF5 831 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 B3GALT1Q9Y5Z6 326 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 SDK2Q58EX2 2172 aa11.75□□□□□ -0.53
SRP54-206ENST00000555317 ADAMTS20P59510 1910 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 IGHV5-51A0A0C4DH38 117 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 PIPSLA2A3N6 862 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 VPS26AO75436 327 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 S1PR4O95977 384 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 ITPKBP27987 946 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 ATP5DP30049 168 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 CCNFP41002 786 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 RAB28P51157 221 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 KPNA2P52292 529 aaKnown RBP11.74□□□□□ -0.53
SRP54-206ENST00000555317 MPP1Q00013 466 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 CAV1Q03135 178 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 ACY1Q03154 408 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 TLE3Q04726 772 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 TUBB3Q13509 450 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 TUBB2AQ13885 445 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 IL11RAQ14626 422 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 COL28A1Q2UY09 1125 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 MANEAQ5SRI9 462 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 CNSTQ6PJW8 725 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 UNC5AQ6ZN44 842 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 KIAA0408Q6ZU52 694 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 ANKMY2Q8IV38 441 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 VRK3Q8IV63 474 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 ZBED8Q8IZ13 594 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 BMPERQ8N8U9 685 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 FBXO36Q8NEA4 188 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 KLHL6Q8WZ60 621 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 KCNJ9Q92806 393 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 CERS2Q96G23 380 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 ELMO2Q96JJ3 720 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 PWWP2AQ96N64 755 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 TUBB2BQ9BVA1 445 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 RAB11FIP5Q9BXF6 653 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 ULBP3Q9BZM4 244 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 LATS2Q9NRM7 1088 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 FAM114A2Q9NRY5 505 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 ACTR10Q9NZ32 417 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 ZFATQ9P243 1243 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 RARRES3Q9UL19 164 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 PLAGL1Q9UM63 463 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 LHX6Q9UPM6 363 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 ICKQ9UPZ9 632 aa11.74□□□□□ -0.53
SRP54-206ENST00000555317 BTN3A3O00478 584 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 CHRM5P08912 532 aaPredicted RBP11.73□□□□□ -0.53
SRP54-206ENST00000555317 EBLN1P0CF75 366 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 CARSP49589 748 aaKnown RBP11.73□□□□□ -0.53
SRP54-206ENST00000555317 CXADRP78310 365 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 SH3BP2P78314 561 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 CLN3Q13286 438 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 ZNF789Q5FWF6 425 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 UGT3A1Q6NUS8 523 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 SPESP1Q6UW49 350 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 ZNF572Q7Z3I7 529 aaPredicted RBP11.73□□□□□ -0.53
SRP54-206ENST00000555317 PPP1R3BQ86XI6 285 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 IGDCC3Q8IVU1 814 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 UNC5BQ8IZJ1 945 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 IL22RA1Q8N6P7 574 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 C2CD4AQ8NCU7 369 aaPredicted RBP11.73□□□□□ -0.53
SRP54-206ENST00000555317 KIF18AQ8NI77 898 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 PYROXD1Q8WU10 500 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 N4BP2L2Q92802 583 aaPredicted RBP11.73□□□□□ -0.53
SRP54-206ENST00000555317 PMEPA1Q969W9 287 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 SLC41A2Q96JW4 573 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 CCNL2Q96S94 520 aaPredicted RBP11.73□□□□□ -0.53
SRP54-206ENST00000555317 C1GALT1Q9NS00 363 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 SIDT1Q9NXL6 827 aaKnown RBP11.73□□□□□ -0.53
SRP54-206ENST00000555317 TRMT6Q9UJA5 497 aaKnown RBP11.73□□□□□ -0.53
SRP54-206ENST00000555317 CDYLQ9Y232 598 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 TEX264Q9Y6I9 313 aa11.73□□□□□ -0.53
SRP54-206ENST00000555317 IGSF10Q6WRI0 2623 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 SLC9B1P1A6NJY1 282 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 ISM1B1AKI9 464 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 EIF3HO15372 352 aaKnown RBP eCLIP11.72□□□□□ -0.53
SRP54-206ENST00000555317 KRT37O76014 449 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 STK17BO94768 372 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 HAUS5O94927 633 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 CATP04040 527 aaKnown RBP11.72□□□□□ -0.53
SRP54-206ENST00000555317 F7P08709 466 aaPredicted RBP11.72□□□□□ -0.53
SRP54-206ENST00000555317 ENO3P13929 434 aaPredicted RBP11.72□□□□□ -0.53
SRP54-206ENST00000555317 MAP4P27816 1152 aaKnown RBP11.72□□□□□ -0.53
SRP54-206ENST00000555317 PRDX3P30048 256 aaKnown RBP11.72□□□□□ -0.53
SRP54-206ENST00000555317 PKLRP30613 574 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 BDKRB1P46663 353 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 PLTPP55058 493 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms