RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 OR52A5Q9H2C5 316 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 MBNL1Q9NR56 388 aaKnown RBP8.68□□□□□ -1.02
TDP1-210ENST00000554976 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.68□□□□□ -1.02
TDP1-210ENST00000554976 MAP10Q9P2G4 905 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 OPTCQ9UBM4 332 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 PRPF19Q9UMS4 504 aaKnown RBP8.68□□□□□ -1.02
TDP1-210ENST00000554976 RNF11Q9Y3C5 154 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 ZSCAN9O15535 394 aaPredicted RBP8.68□□□□□ -1.02
TDP1-210ENST00000554976 STK16O75716 305 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 C1orf105O95561 183 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 S100BP04271 92 aaPredicted RBP8.68□□□□□ -1.02
TDP1-210ENST00000554976 ERGP11308 486 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 CAPN3P20807 821 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 IL12AP29459 219 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 PEX19P40855 299 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 DIO3P55073 304 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 ERVK-8P63133 956 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 COQ5Q5HYK3 327 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 BLOC1S3Q6QNY0 202 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 RIPOR1Q6ZS17 1223 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 DEFB107AQ8IZN7 70 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 DCBLD1Q8N8Z6 715 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 SNX31Q8N9S9 440 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 OR56A3Q8NH54 315 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 CXorf40AQ8TE69 158 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 DNASE1L2Q92874 299 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 SLC45A3Q96JT2 553 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 OR4K3Q96R72 315 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 NPAS2Q99743 824 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 C1QTNF2Q9BXJ5 285 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 SLC29A3Q9BZD2 475 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 FBRSQ9HAH7 460 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 WWOXQ9NZC7 414 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 CD207Q9UJ71 328 aa8.68□□□□□ -1.02
TDP1-210ENST00000554976 IGLON5A6NGN9 336 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 LOC730098B7Z3J9 87 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 LIN7AO14910 233 aaPredicted RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 FUCA1P04066 466 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 IDO1P14902 403 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 IMPA1P29218 277 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 TIE1P35590 1138 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 WASP42768 502 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 SEC13P55735 322 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 YBX1P67809 324 aaKnown RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 CDK3Q00526 305 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 TBL3Q12788 808 aaKnown RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 RCAN2Q14206 197 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 ZNF776Q68DI1 518 aaPredicted RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 RAET1GQ6H3X3 334 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 RALGPS2Q86X27 583 aaPredicted RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 KYQ8NBH2 561 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 SCARF2Q96GP6 870 aaPredicted RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 PKP4Q99569 1192 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 EBF2Q9HAK2 575 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 FARSBQ9NSD9 589 aaKnown RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 STOX2Q9P2F5 926 aaPredicted RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 CD300AQ9UGN4 299 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 G3BP2Q9UN86 482 aaKnown RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 FXYD1O00168 92 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 MANBAO00462 879 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 RSL1D1O76021 490 aaKnown RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 PSMG1O95456 288 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 CYP2A7P20853 494 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 NTSR1P30989 418 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 MAPK9P45984 424 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 GPR1P46091 355 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 PIK3CGP48736 1102 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 EMX2Q04743 252 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 CEACAM7Q14002 265 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 IRF4Q15306 451 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 TLR1Q15399 786 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 TRMT5Q32P41 509 aaKnown RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 CWF19L1Q69YN2 538 aaKnown RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 CAPRIN2Q6IMN6 1127 aaKnown RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 C16orf89Q6UX73 402 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 RNF111Q6ZNA4 994 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 DDIASQ8IXT1 998 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 SLC44A3Q8N4M1 653 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 WDR20Q8TBZ3 569 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 TSPEARQ8WU66 669 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 ERLEC1Q96DZ1 483 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 C11orf24Q96F05 449 aaPredicted RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 FAM161BQ96MY7 647 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 SLX1AQ9BQ83 275 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 ZDHHC5Q9C0B5 715 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 SLC6A17Q9H1V8 727 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 OR2AG1Q9H205 316 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 ARL15Q9NXU5 204 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 TMEM181Q9P2C4 612 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 ABCD2Q9UBJ2 740 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 A0A1W2PP55 124 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 BBIP1A8MTZ0 92 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 ACOT8O14734 319 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 SNRPB2P08579 225 aaKnown RBP8.67□□□□□ -1.02
TDP1-210ENST00000554976 BDKRB1P46663 353 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 NUDT2P50583 147 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 DMPKQ09013 629 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 PON2Q15165 354 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 PTCHD3Q3KNS1 767 aa8.67□□□□□ -1.02
TDP1-210ENST00000554976 SLC44A4Q53GD3 710 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms