RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 ASB12Q8WXK4 309 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 SCAMP4Q969E2 229 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 FUBP1Q96AE4 644 aaKnown RBP17.02■□□□□ 0.31
SHOX-204ENST00000554971 AARSD1Q9BTE6 412 aaKnown RBP17.02■□□□□ 0.31
SHOX-204ENST00000554971 MIR1-1HGQ9H1L0 117 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 ALG9Q9H6U8 611 aa17.02■□□□□ 0.31
SHOX-204ENST00000554971 MARCH4Q9P2E8 410 aaPredicted RBP17.02■□□□□ 0.31
SHOX-204ENST00000554971 CNOT11Q9UKZ1 510 aaKnown RBP17.02■□□□□ 0.31
SHOX-204ENST00000554971 G3BP2Q9UN86 482 aaKnown RBP17.02■□□□□ 0.31
SHOX-204ENST00000554971 TMEM233B4DJY2 109 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 LZTS3O60299 673 aaPredicted RBP17.01■□□□□ 0.31
SHOX-204ENST00000554971 EPN2O95208 641 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 HNRNPA2B1P22626 353 aaKnown RBP17.01■□□□□ 0.31
SHOX-204ENST00000554971 IGFALSP35858 605 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 SPINT3P49223 89 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 CLDN2P57739 230 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 PSME3P61289 254 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 SGCGQ13326 291 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 LRP8Q14114 963 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 FASTKQ14296 549 aaKnown RBP17.01■□□□□ 0.31
SHOX-204ENST00000554971 UNC50Q53HI1 259 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 SFT2D3Q587I9 215 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 WDR45BQ5MNZ6 344 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 TMEM207Q6UWW9 146 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 GCNT7Q6ZNI0 430 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 GLT6D1Q7Z4J2 308 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 PLA2G15Q8NCC3 412 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 PIGKQ92643 395 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 ROPN1LQ96C74 230 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 BMFQ96LC9 184 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 GPR63Q9BZJ6 419 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 CYP4F12Q9HCS2 524 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 TM9SF3Q9HD45 589 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 BPIFA1Q9NP55 256 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 ACSS2Q9NR19 701 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 IL17CQ9P0M4 197 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 DTNAQ9Y4J8 743 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 SPTBN4Q9H254 2564 aa17.01■□□□□ 0.31
SHOX-204ENST00000554971 ARID1BQ8NFD5 2236 aaPredicted RBP17.01■□□□□ 0.31
SHOX-204ENST00000554971 GOLGA4Q13439 2230 aaKnown RBP17■□□□□ 0.31
SHOX-204ENST00000554971 ASCC3Q8N3C0 2202 aaKnown RBP17■□□□□ 0.31
SHOX-204ENST00000554971 CCDC162PA2VCL2 907 aa17■□□□□ 0.31
SHOX-204ENST00000554971 PATE3B3GLJ2 98 aa17■□□□□ 0.31
SHOX-204ENST00000554971 PROB1E7EW31 1015 aa17■□□□□ 0.31
SHOX-204ENST00000554971 H0YJX3 145 aa17■□□□□ 0.31
SHOX-204ENST00000554971 SUPT7LO94864 414 aa17■□□□□ 0.31
SHOX-204ENST00000554971 SOD1P00441 154 aa17■□□□□ 0.31
SHOX-204ENST00000554971 WNT1P04628 370 aa17■□□□□ 0.31
SHOX-204ENST00000554971 ZNF37AP17032 561 aaPredicted RBP17■□□□□ 0.31
SHOX-204ENST00000554971 XRCC1P18887 633 aaPredicted RBP17■□□□□ 0.31
SHOX-204ENST00000554971 PEX2P28328 305 aa17■□□□□ 0.31
SHOX-204ENST00000554971 PMLP29590 882 aa17■□□□□ 0.31
SHOX-204ENST00000554971 TRIM25Q14258 630 aaKnown RBP17■□□□□ 0.31
SHOX-204ENST00000554971 IRF4Q15306 451 aa17■□□□□ 0.31
SHOX-204ENST00000554971 TAF1AQ15573 450 aaPredicted RBP17■□□□□ 0.31
SHOX-204ENST00000554971 MMEL1Q495T6 779 aa17■□□□□ 0.31
SHOX-204ENST00000554971 SPATS1Q496A3 300 aa17■□□□□ 0.31
SHOX-204ENST00000554971 LPCAT4Q643R3 524 aa17■□□□□ 0.31
SHOX-204ENST00000554971 LAIR1Q6GTX8 287 aa17■□□□□ 0.31
SHOX-204ENST00000554971 ZNF549Q6P9A3 640 aa17■□□□□ 0.31
SHOX-204ENST00000554971 AFTPHQ6ULP2 937 aa17■□□□□ 0.31
SHOX-204ENST00000554971 CYP2U1Q7Z449 544 aa17■□□□□ 0.31
SHOX-204ENST00000554971 SYT12Q8IV01 421 aa17■□□□□ 0.31
SHOX-204ENST00000554971 ST13P4Q8IZP2 240 aaPredicted RBP17■□□□□ 0.31
SHOX-204ENST00000554971 GPR26Q8NDV2 337 aa17■□□□□ 0.31
SHOX-204ENST00000554971 HIPK4Q8NE63 616 aa17■□□□□ 0.31
SHOX-204ENST00000554971 STAG3L4Q8TBR4 150 aa17■□□□□ 0.31
SHOX-204ENST00000554971 PHF21BQ96EK2 531 aa17■□□□□ 0.31
SHOX-204ENST00000554971 DUS3LQ96G46 650 aaKnown RBP17■□□□□ 0.31
SHOX-204ENST00000554971 CDKN2AIPNLQ96HQ2 116 aa17■□□□□ 0.31
SHOX-204ENST00000554971 LOXL4Q96JB6 756 aa17■□□□□ 0.31
SHOX-204ENST00000554971 DNAJC1Q96KC8 554 aaKnown RBP17■□□□□ 0.31
SHOX-204ENST00000554971 DERL2Q9GZP9 239 aa17■□□□□ 0.31
SHOX-204ENST00000554971 ARRDC1-AS1Q9H2J1 176 aa17■□□□□ 0.31
SHOX-204ENST00000554971 SMOC1Q9H4F8 434 aa17■□□□□ 0.31
SHOX-204ENST00000554971 RAB26Q9ULW5 256 aa17■□□□□ 0.31
SHOX-204ENST00000554971 DMTF1Q9Y222 760 aa17■□□□□ 0.31
SHOX-204ENST00000554971 PRAMEF26H0Y7S4 382 aa17■□□□□ 0.31
SHOX-204ENST00000554971 CFLARO15519 480 aa17■□□□□ 0.31
SHOX-204ENST00000554971 BPIP17213 487 aa17■□□□□ 0.31
SHOX-204ENST00000554971 ERFP50548 548 aa17■□□□□ 0.31
SHOX-204ENST00000554971 STX1BP61266 288 aa17■□□□□ 0.31
SHOX-204ENST00000554971 UGT3A2Q3SY77 523 aa17■□□□□ 0.31
SHOX-204ENST00000554971 KIAA1191Q96A73 305 aa17■□□□□ 0.31
SHOX-204ENST00000554971 NUS1Q96E22 293 aa17■□□□□ 0.31
SHOX-204ENST00000554971 GBP5Q96PP8 586 aa17■□□□□ 0.31
SHOX-204ENST00000554971 ABCG8Q9H221 673 aa17■□□□□ 0.31
SHOX-204ENST00000554971 TAS2R13Q9NYV9 303 aa17■□□□□ 0.31
SHOX-204ENST00000554971 PCDHGA7Q9Y5G6 932 aa17■□□□□ 0.31
SHOX-204ENST00000554971 LRP4O75096 1905 aa16.99■□□□□ 0.31
SHOX-204ENST00000554971 PIKFYVEQ9Y2I7 2098 aa16.99■□□□□ 0.31
SHOX-204ENST00000554971 PRSS51A0A1B0GVH4 220 aa16.99■□□□□ 0.31
SHOX-204ENST00000554971 A0A1W2PR77 199 aa16.99■□□□□ 0.31
SHOX-204ENST00000554971 C2orf81A6NN90 581 aa16.99■□□□□ 0.31
SHOX-204ENST00000554971 SYCE1LA8MT33 242 aa16.99■□□□□ 0.31
SHOX-204ENST00000554971 BCAT2O15382 392 aaPredicted RBP16.99■□□□□ 0.31
SHOX-204ENST00000554971 SKAP2O75563 359 aaPredicted RBP16.99■□□□□ 0.31
SHOX-204ENST00000554971 NUDT1P36639 197 aa16.99■□□□□ 0.31
SHOX-204ENST00000554971 ZNF140P52738 457 aaPredicted RBP16.99■□□□□ 0.31
SHOX-204ENST00000554971 RACK1P63244 317 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms