RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 NUDCD3Q8IVD9 361 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 MYO1HQ8N1T3 1032 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 FSTL5Q8N475 847 aaPredicted RBP14.16□□□□□ -0.14
SHMT2-208ENST00000553868 PPP1R14CQ8TAE6 165 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 FAM136AQ96C01 138 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 CCDC126Q96EE4 140 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 LINGO1Q96FE5 620 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 PDLIM5Q96HC4 596 aaKnown RBP14.16□□□□□ -0.14
SHMT2-208ENST00000553868 COX14Q96I36 57 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 TEX101Q9BY14 249 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 TFB2MQ9H5Q4 396 aaKnown RBP14.16□□□□□ -0.14
SHMT2-208ENST00000553868 EBF2Q9HAK2 575 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 WDR70Q9NW82 654 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 COPG2Q9UBF2 871 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 EMCNQ9ULC0 261 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 CACNA1DQ01668 2161 aa14.16□□□□□ -0.14
SHMT2-208ENST00000553868 FBN2P35556 2912 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 A0A1W2PNU3 283 aaPredicted RBP14.15□□□□□ -0.14
SHMT2-208ENST00000553868 CLEC18AA5D8T8 446 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 KLHL33A6NCF5 533 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 SYCE1LA8MT33 242 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 K7ESM1 405 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 TOR1BO14657 336 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 FPGTO14772 594 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 EFSO43281 561 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 DNAJC6O75061 913 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 H2AFYO75367 372 aaKnown RBP14.15□□□□□ -0.14
SHMT2-208ENST00000553868 CD1DP15813 335 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 TFEBP19484 476 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 HNRNPA2B1P22626 353 aaKnown RBP14.15□□□□□ -0.14
SHMT2-208ENST00000553868 MAT2AP31153 395 aaKnown RBP14.15□□□□□ -0.14
SHMT2-208ENST00000553868 AKT2P31751 481 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 TRIM23P36406 574 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 GLRBP48167 497 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 LSSP48449 732 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 PRLHRP49683 370 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 PPP2CBP62714 309 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 RACK1P63244 317 aaKnown RBP14.15□□□□□ -0.14
SHMT2-208ENST00000553868 PPP2CAP67775 309 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 DLG1Q12959 904 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 FGL2Q14314 439 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 INPP5AQ14642 412 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 IGFBP7Q16270 282 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 TECRLQ5HYJ1 363 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 PLEKHS1Q5SXH7 462 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 ATG16L1Q676U5 607 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 KIAA0895LQ68EN5 471 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 TMEM207Q6UWW9 146 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 CLEC18BQ6UXF7 455 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 ZYG11AQ6WRX3 759 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 RGS9BPQ6ZS82 235 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 ADGRG6Q86SQ4 1221 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 CPNE9Q8IYJ1 553 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 LSMEM2Q8N112 164 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 RASGEF1AQ8N9B8 481 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 PLA2G15Q8NCC3 412 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 CLEC18CQ8NCF0 446 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 RHEBL1Q8TAI7 183 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 STAG3L4Q8TBR4 150 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 ANKRD49Q8WVL7 239 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 ASZ1Q8WWH4 475 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 KLK6Q92876 244 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 KIAA1191Q96A73 305 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 SGF29Q96ES7 293 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 GPR78Q96P69 363 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 CCM2Q9BSQ5 444 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 NSRP1Q9H0G5 558 aaKnown RBP14.15□□□□□ -0.14
SHMT2-208ENST00000553868 OR2AG1Q9H205 316 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 C12orf65Q9H3J6 166 aaKnown RBP14.15□□□□□ -0.14
SHMT2-208ENST00000553868 POLR1BQ9H9Y6 1135 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 THSD1Q9NS62 852 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 ZNF358Q9NW07 568 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 XPR1Q9UBH6 696 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 TMCO1Q9UM00 188 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 GPR34Q9UPC5 381 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 DMTF1Q9Y222 760 aa14.15□□□□□ -0.14
SHMT2-208ENST00000553868 WDR91A4D1P6 747 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 PMS2P1A4D2B8 440 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 GMNCA6NCL1 334 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 CACNB4O00305 520 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 SLC31A1O15431 190 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 SMIM24O75264 130 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 CSO75390 466 aaKnown RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 VIMP08670 466 aaKnown RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 HOXC4P09017 264 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 MYCLP1P12525 358 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 KELP23276 732 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 ACP1P24666 158 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 AOAHP28039 575 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 MAPK9P45984 424 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 PGGT1BP53609 377 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 PLOD1Q02809 727 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 GABPB1Q06547 395 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 PROX2Q3B8N5 592 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 SYTL3Q4VX76 610 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 KHDC1Q4VXA5 237 aaKnown RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 TMEM220Q6QAJ8 160 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 KANSL1Q7Z3B3 1105 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 ADAMTSL2Q86TH1 951 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 TRAPPC5Q8IUR0 188 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms